Helicobacter cetorum MIT 99-5656

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter cetorum MIT 99-5656 is a bacterium characterized by its possession of two replicons, which are essential for its genetic stability and replication. The organism's genomic information is accessible through two specific accession numbers: NC_017736.1 and NC_017735.1. This species falls under the genus Helicobacter, known for its association with various gastrointestinal diseases in different hosts. The presence of two replicons in H. cetorum may provide insights into its adaptability and potential pathogenic mechanisms, as multiple replicons can facilitate diverse regulatory and metabolic capabilities. The genomic data available for H. cetorum could contribute to understanding its ecological niche, particularly in relation to the host environments it inhabits. The dual-replicon structure might suggest a level of complexity in gene expression regulation, which could enable H. cetorum to thrive in varying conditions and possibly interact with other microorganisms in its habitat. In summary, the genomic structure of Helicobacter cetorum MIT 99-5656, characterized by its two replicons, provides a foundation for further investigations into its biological properties and ecological interactions. This trait may play a significant role in its adaptability and potential as a pathogen, reinforcing the importance of genomic studies in understanding the dynamics of microbial life.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter cetorum
StrainMIT 99-5656

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter cetorum MIT 99-5656
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter cetorum MIT 99-5656 plasmid pHCD, complete sequence.

Gene Summary

Adenine Count

5145 bp

Thymine Count

4357 bp

Guanine Count

2267 bp

Cytosine Count

2355 bp

Genome Length

14124 bp

Protein-coding Genes

17 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
utp--glucose-1-phosphate uridylyltransferase galuHCD_RS06790Not AvailableNegative1440365 - 144118630783.6
lytic transglycosylase domain-containing proteinHCD_RS06795Not AvailableNegative1441183 - 144286565419.2
yggt family proteinHCD_RS06800Not AvailableNegative1442878 - 144317111214.4
glutamate--trna ligaseHCD_RS06805Not AvailableNegative1443168 - 144448751162.1
trna lysidine(34) synthetase tilsHCD_RS06810Not AvailableNegative1444551 - 144556740006.7
30s ribosomal protein s12 methylthiotransferase rimoHCD_RS06815Not AvailableNegative1445583 - 144690249811.9
phosphoribosyltransferaseHCD_RS06820Not AvailableNegative1446904 - 144736517660.2
alanine--glyoxylate aminotransferase family proteinHCD_RS06825Not AvailableNegative1447374 - 144848341827.1
phosphatidylglycerophosphatase aHCD_RS06830Not AvailablePositive1448646 - 144912217054.5
d-alanine--d-alanine ligaseHCD_RS06835Not AvailablePositive1449200 - 145026140096.5

Displaying genes 1401 – 1410 of 1779 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.