Francisella orientalis str. Toba 04

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Francisellaceae

Genus

Francisella

Description

Francisella orientalis str. Toba 04 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses flagella, indicating the potential for motility. It has a single replicon, which is indicative of its genomic structure, and is documented under the accession number NC_017909.1. The presence of flagella in Francisella orientalis str. Toba 04 suggests that it may have evolved mechanisms for movement within its environment, which could be significant for its survival and ecological interactions. As a Gram-negative bacterium, it likely has a complex cell wall structure that includes an outer membrane, contributing to its pathogenicity and resistance to certain antibiotics. Understanding the traits of Francisella orientalis str. Toba 04 can provide insight into its ecological role. Gram-negative bacteria often participate in diverse ecological functions, such as nutrient cycling and interactions within microbial communities. The motility conferred by flagella may enhance its ability to colonize specific niches or evade host defenses. This could have implications for its behavior in various environments, including aquatic ecosystems where it was originally isolated. Overall, the traits of Francisella orientalis str. Toba 04 highlight its potential ecological versatility and importance within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyFrancisellaceae
GenusFrancisella
SpeciesFrancisella orientalis
StrainToba 04

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Francisella orientalis str. Toba 04
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Francisella orientalis str. Toba 04, complete sequence.

Gene Summary

Adenine Count

621848 bp

Thymine Count

630254 bp

Guanine Count

326192 bp

Cytosine Count

268908 bp

Genome Length

1847202 bp

Protein-coding Genes

1969 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s ribosomal rnaNot AvailableNot AvailablePositive459402 - 462288Not Available
Trna-alaNot AvailableNot AvailablePositive462339 - 462414Not Available
Trna-ileNot AvailableNot AvailablePositive462423 - 462499Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive462596 - 464123Not Available
pentapeptide repeat-containing proteinOOM_RS02530Not AvailablePositive464399 - 46509726308.9
hypothetical proteinOOM_RS02535Not AvailablePositive465520 - 46614623286.2
trna 5-hydroxyuridine modification protein yegqOOM_RS02540Not AvailableNegative466340 - 46766850179.9
protein-l-isoaspartate o-methyltransferase family proteinOOM_RS02545Not AvailablePositive467888 - 46850823605.6
tolc family proteinOOM_RS02550Not AvailablePositive468516 - 47004557460.0
4'-phosphopantetheinyl transferase family proteinOOM_RS02555Not AvailablePositive470054 - 47070725878.6

Displaying genes 531 – 540 of 2012 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.