Leptospirillum ferrooxidans C2-3

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Nitrospirales

Family

Nitrospiraceae

Genus

Leptospirillum

Description

Leptospirillum ferrooxidans C2-3 is a notable chemolithoautotrophic bacterium primarily recognized for its role in the bioleaching of metals. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in its ecological niche. The genomic sequence of L. ferrooxidans C2-3 is accessible under the accession number NC_017094.1, providing a resource for further exploration of its metabolic capabilities and genetic traits. As a member of the Acidithiobacillia class, L. ferrooxidans C2-3 thrives in acidic environments, utilizing ferrous iron as an energy source while oxidizing it to ferric iron. This metabolic pathway is significant in biogeochemical cycles, particularly in environments where iron and sulfur compounds are prevalent. The organism's ability to oxidize iron not only plays a crucial role in its survival but also impacts metal recovery processes in mining operations. In summary, Leptospirillum ferrooxidans C2-3 is characterized by a single replicon and its genomic information available under NC_017094.1. Its chemolithoautotrophic nature and iron-oxidizing capabilities highlight its ecological importance in metal bioleaching and biogeochemical cycling, underscoring the potential applications of this bacterium in biotechnology and environmental remediation.

Taxonomy

KingdomPseudomonadati
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusLeptospirillum
SpeciesLeptospirillum ferrooxidans
StrainC2-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leptospirillum ferrooxidans C2-3, complete sequence.

Gene Summary

Adenine Count

641505 bp

Thymine Count

637047 bp

Guanine Count

637398 bp

Cytosine Count

643588 bp

Genome Length

2559538 bp

Protein-coding Genes

2430 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinLFE_RS00405Not AvailablePositive85558 - 8593513870.0
zf-hc2 domain-containing proteinLFE_RS00415Not AvailablePositive86359 - 8663110393.7
sigma-70 family rna polymerase sigma factorLFE_RS00420P45215Positive86628 - 8720022037.9
response regulator transcription factorLFE_RS00425B2S753Positive87736 - 8841925444.1
sensor histidine kinaseLFE_RS00430Not AvailablePositive88416 - 8984052875.5
periplasmic heavy metal sensorLFE_RS00435Not AvailablePositive89951 - 9046319712.2
helix-turn-helix transcriptional regulatorLFE_RS00440Not AvailablePositive90651 - 9103413770.5
arsenate reductase arscLFE_RS00445P45947Positive91031 - 9151017775.7
arsenite efflux transporter metallochaperone arsdLFE_RS00450P46003Positive91586 - 9195712822.3
arsenical pump-driving atpaseLFE_RS00455P08690Positive92009 - 9380264696.7

Displaying genes 81 – 90 of 2494 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

131 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da

Displaying 1–10 of 131 metabolites

Health Effects

No health effects information available for this bacterium.