Erwinia piriflorinigrans CFBP 5888 str. CFBP5888

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

Erwinia piriflorinigrans CFBP 5888 str. CFBP5888 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This strain exhibits a facultative aerobe/anaerobe oxygen requirement, allowing it to thrive in varying oxygen conditions. It is classified as mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate environmental temperatures. E. piriflorinigrans CFBP 5888 is non-spore-forming and contains a single replicon, which is important for its genetic stability and replication. The strain has been cataloged under the accession number CAHS00000000.1, providing a reference for further research and study. From a biological and ecological perspective, the traits of E. piriflorinigrans suggest it may play a role in specific environmental niches where moderate temperatures and variable oxygen levels are present. Its adaptability to different oxygen conditions could allow it to occupy diverse habitats, potentially influencing the microbial dynamics in its ecosystem. Understanding its characteristics can also provide insights into its interactions with plant hosts or other microorganisms, contributing to the knowledge of plant-associated bacterial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesErwinia piriflorinigrans
StrainCFBP 5888 CFBP5888

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Erwinia piriflorinigrans CFBP 5888 str. CFBP5888
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Erwinia piriflorinigrans CFBP 5888 WGS project CAHS00000000 data,

Gene Summary

Adenine Count

924927 bp

Thymine Count

926079 bp

Guanine Count

1038573 bp

Cytosine Count

1041076 bp

Genome Length

3930655 bp

Protein-coding Genes

3759 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative transposase for transposon tn903EPIR_3050Not AvailablePositive3165082 - 316583728754.6
putative transposase for transposon tn903EPIR_3051P03009Positive3165865 - 31660055147.46
hypothetical proteinEPIR_3052Q9I741Negative3166333 - 316828571473.9
hypothetical proteinEPIR_3053Not AvailablePositive3168269 - 31684546721.4
hypothetical proteinEPIR_3054Not AvailableNegative3168570 - 316894714093.8
hypothetical proteinEPIR_3057Not AvailableNegative3172265 - 31723784364.12
hypothetical proteinEPIR_3058Not AvailableNegative3172402 - 317283616355.8
putative serine/threonine protein kinaseEPIR_3059Q9XBQ0Negative3173173 - 317458251276.0
putative type vi secretion system, core protein atpaseEPIR_3060Q9I742Negative3174612 - 317722795889.4
putative type vi secretion system, core proteinEPIR_3061Not AvailableNegative3177324 - 317838840171.1

Displaying genes 3151 – 3160 of 3872 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

238 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da

Displaying 1–10 of 238 metabolites

Health Effects

No health effects information available for this bacterium.