Micromonospora lupini str. Lupac 08

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Micromonospora lupini strain Lupac 08 is a Gram-positive, aerobic bacterium that exhibits notable adaptability in its ecological niches, primarily inhabiting both ecto- and endo-rhizospheres, as well as nitrogen-fixing nodules associated with leguminous hosts such as Lupinus angustifolius and other Lupinus species. This bacterium demonstrates a mesophilic temperature range, with an optimal growth temperature of 29°C, which aligns with the typical conditions found in rhizospheres. Lupac 08 is characterized by its ability to form spores, a trait that enhances its survival in fluctuating environmental conditions. The presence of flagella indicates motility, which may facilitate its movement within the complex root environments where it resides. With a single replicon, Micromonospora lupini shows a streamlined genomic organization that may contribute to its efficiency in nutrient utilization and adaptation to its ecological niche. The ecological role of Micromonospora lupini strain Lupac 08 is significant, particularly in its association with leguminous plants. By residing in nitrogen-fixing nodules, it likely plays a crucial role in the nitrogen cycle, contributing to soil fertility. This symbiotic relationship not only benefits the host plants by enhancing their nitrogen supply but also supports broader ecosystem health by improving soil structure and nutrient availability. The presence of such bacteria underscores the intricate interactions within soil microbial communities and their importance in sustainable agricultural practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora lupini
StrainLupac 08

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatecto- and endo-rhizospheres; ecto- or endo-rhizospheres; nitrogen fixing nodules
Biotic relationshipNot Available
Host(s)Lupinus angustifolius, Lupinus sp.
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora lupini str. Lupac 08, WGS project CAIE01000000

Gene Summary

Adenine Count

1024577 bp

Thymine Count

1028161 bp

Guanine Count

2632690 bp

Cytosine Count

2635793 bp

Genome Length

7321224 bp

Protein-coding Genes

7019 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amylo-alpha-1,6-glucosidase (glycogen debranching enzyme)MILUP08_43195Not AvailablePositive3071370 - 307352378999.5
fad-dependent pyridine nucleotide-disulphide oxidoreductaseMILUP08_43196P95200Positive3073570 - 307487146894.6
conserved membrane hypothetical proteinMILUP08_43197P9WFM4Negative3074895 - 307601939495.4
spermine synthaseMILUP08_43198Not AvailableNegative3076057 - 307683927752.7
conserved hypothetical proteinMILUP08_43199Not AvailableNegative3077062 - 307803633994.9
sulfate transporter/antisigma-factor antagonist stas (fragment)MILUP08_43200Not AvailableNegative3078927 - 307926811924.3
sulfate transporter/antisigma-factor antagonist stasMILUP08_43201Not AvailableNegative3079327 - 307972813791.7
serine phosphatase rsbu, regulator of sigma subunitMILUP08_43202P37979Positive3079933 - 308169961685.2
cobalamin b12-binding domain proteinMILUP08_43203Not AvailablePositive3081696 - 308273936946.9
sulphate transporter/antisigma-factor antagonist stasMILUP08_43204Not AvailablePositive3082846 - 308319311995.2

Displaying genes 2981 – 2990 of 7106 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

408 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 408 metabolites

Health Effects

No health effects information available for this bacterium.