Pseudomonas mandelii JR-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas mandelii JR-1 is characterized by the presence of two replicons, which are essential for its genetic stability and adaptability. The organism has been cataloged with the following GenBank accession numbers: NZ_CP005961.1 and NZ_CP005960.1. These accessions indicate the genomic sequences that provide insights into its genetic makeup and potential functional capabilities. The dual-replicon structure of Pseudomonas mandelii JR-1 may contribute to its metabolic versatility and ability to thrive in various environments. This trait is common among Pseudomonas species, allowing them to adapt to different ecological niches and utilize a wide range of substrates for growth. Such flexibility is particularly relevant in ecological contexts where competition for resources is intense. Additionally, the presence of two replicons can enhance the organism’s resilience against environmental stresses, potentially allowing it to survive in challenging conditions. This trait may also play a role in the organism's interactions with other microorganisms within its habitat, influencing community dynamics and ecological balance. In summary, the genomic structure of Pseudomonas mandelii JR-1, with its two replicons, underscores its potential for metabolic diversity and adaptation to various ecological niches, which may have significant implications for its survival and interactions in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas mandelii
StrainJR-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas mandelii JR-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

92138 bp

Thymine Count

92247 bp

Guanine Count

113260 bp

Cytosine Count

112867 bp

Genome Length

410512 bp

Protein-coding Genes

416 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit nuofOU5_RS05880Not AvailablePositive1334115 - 133547048833.9
nadh-quinone oxidoreductase subunit nuogOU5_RS05885Not AvailablePositive1335608 - 133832298203.5
nadh-quinone oxidoreductase subunit nuohOU5_RS05890Not AvailablePositive1338319 - 133932637438.7
nadh-quinone oxidoreductase subunit nuoiOU5_RS05895Not AvailablePositive1339339 - 133988420575.8
nadh-quinone oxidoreductase subunit jOU5_RS05900Not AvailablePositive1339894 - 134039717785.3
nadh-quinone oxidoreductase subunit nuokOU5_RS05905Not AvailablePositive1340400 - 134070810998.0
nadh-quinone oxidoreductase subunit lOU5_RS05910Not AvailablePositive1340705 - 134255866477.5
nadh-quinone oxidoreductase subunit mOU5_RS05915Not AvailablePositive1342599 - 134413155808.8
nadh-quinone oxidoreductase subunit nuonOU5_RS05920Not AvailablePositive1344139 - 134560251791.9
toxinOU5_RS05925Not AvailablePositive1345891 - 134624113977.5

Displaying genes 1751 – 1760 of 6654 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.