Pseudomonas sp. GM50

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. GM50 is characterized by a single replicon, which indicates a streamlined genomic organization. This trait may contribute to its adaptability and efficiency in various environments. The genome of Pseudomonas sp. GM50 is catalogued under the accession number AKJK00000000.1, which allows for its identification and further research in genomic studies. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse ecological niches, including soil and aquatic environments. Their ability to adapt to different conditions can be attributed to their complex regulatory networks and gene expression profiles, although specific metabolic pathways or traits for GM50 are not detailed here. The presence of a single replicon in Pseudomonas sp. GM50 may suggest a more efficient replication process, which can be advantageous for survival in fluctuating environments. This efficiency could lead to rapid population growth under optimal conditions, allowing the organism to exploit available resources effectively. In a broader ecological context, Pseudomonas sp. GM50 may play a significant role in nutrient cycling and soil health, contributing to the degradation of organic matter and the maintenance of microbial diversity. Its genetic characteristics, coupled with its ecological versatility, underscore the importance of studying such microorganisms for their potential applications in bioremediation and agriculture. Understanding the traits of Pseudomonas sp. GM50 can provide insights into microbial interactions and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. GM50
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. GM50
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. GM50 PMI30_contig_199.199, whole genome shotgun

Gene Summary

Adenine Count

1365383 bp

Thymine Count

1380754 bp

Guanine Count

1981181 bp

Cytosine Count

1964825 bp

Genome Length

6692143 bp

Protein-coding Genes

5991 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion protein, vc_a0114 familyPMI30_01585Not AvailableNegative1705157 - 170648849637.6
type vi secretion lipoprotein, vc_a0113 familyPMI30_01586Not AvailableNegative1706491 - 170699118387.0
type vi secretion system fha domain proteinPMI30_01587Not AvailableNegative1706997 - 170819344432.5
hypothetical proteinPMI30_01588Not AvailableNegative1708211 - 17083515076.16
transcriptional regulator containing gaf, aaa-type atpase, and dna binding domainsPMI30_01589Not AvailableNegative1708676 - 171019355434.8
type vi secretion atpase, clpv1 familyPMI30_01590Not AvailableNegative1710204 - 171285296309.8
type vi secretion protein, vc_a0111 familyPMI30_01591Not AvailableNegative1712866 - 171387338687.5
type vi secretion protein, vc_a0110 familyPMI30_01592Not AvailableNegative1713837 - 171562468000.0
hypothetical proteinPMI30_01593Not AvailableNegative1715649 - 17158196443.99
hypothetical proteinPMI30_01594Not AvailableNegative1715819 - 171624416780.2

Displaying genes 1631 – 1640 of 6107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.