Pseudomonas sp. GM24

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. GM24 is characterized by having a single replicon, which is a significant trait influencing its genetic stability and replication processes. The organism is associated with the accession number AKJR00000000.1, which serves as a reference for its genomic data. The Pseudomonas genus is known for its metabolic versatility and ability to thrive in diverse environments, often contributing to bioremediation processes due to its capacity to degrade various pollutants. GM24 may share these ecological roles, although specific metabolic pathways and capabilities are not detailed in the provided information. As a member of the Pseudomonas genus, GM24 potentially exhibits traits such as resistance to antibiotics and the ability to form biofilms, which can impact its ecological interactions and survival strategies. These traits are significant as they allow Pseudomonas species to inhabit various niches, including soil, water, and plant surfaces. Overall, the characteristics of Pseudomonas sp. GM24 suggest that it may play a role in environmental microbiology, particularly in contexts where its metabolic capabilities can be harnessed for ecological benefits, such as bioremediation or nutrient cycling. The presence of a single replicon could also indicate streamlined genetic regulation, potentially advantageous for adaptation to specific environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. GM24
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. GM24
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. GM24 PMI23_contig_476.476, whole genome shotgun

Gene Summary

Adenine Count

1332918 bp

Thymine Count

1329435 bp

Guanine Count

1927287 bp

Cytosine Count

1926315 bp

Genome Length

6517063 bp

Protein-coding Genes

5786 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase (ggdef) domain-containing proteinPMI23_01858Not AvailablePositive2119924 - 212204779310.4
putative metal-dependent hydrolasePMI23_01859Not AvailablePositive2122092 - 212258619161.2
hypothetical proteinPMI23_01860Not AvailablePositive2122611 - 212290711218.4
putative acyltransferasePMI23_01861Not AvailableNegative2123108 - 212356017076.4
periplasmic component of amino acid abc-type transporter/signal transduction systemPMI23_01862Not AvailablePositive2123816 - 212455327459.1
putative membrane protein, tigr01666PMI23_01863Not AvailableNegative2124666 - 212685880773.2
flavoprotein, hi0933 familyPMI23_01864Not AvailableNegative2127113 - 212834544763.5
dna/rna helicase, superfamily iiPMI23_01865Not AvailableNegative2128423 - 212980850035.8
drug resistance transporter, emrb/qaca subfamilyPMI23_01866Not AvailableNegative2129889 - 213131650989.2
putative zn-dependent protease-like proteinPMI23_01867Not AvailableNegative2131457 - 213279448419.9

Displaying genes 1861 – 1870 of 5903 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.