Pantoea sp. GM01

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. GM01 is a notable bacterium characterized by the presence of flagella, which suggests potential motility and the ability to navigate its environment. It possesses a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and growth. The genome of Pantoea sp. GM01 is accessible in the database under the accession number AKIU00000000.1, providing a resource for further genomic studies. The presence of flagella in Pantoea sp. GM01 may enhance its adaptability to various ecological niches, allowing it to colonize diverse environments. This motility can be a significant factor in its survival and interaction with other microorganisms. Furthermore, the single replicon structure may indicate a specialized adaptation to its ecological niche, potentially reflecting a symbiotic or pathogenic relationship with host organisms. In summary, the traits of Pantoea sp. GM01—such as flagella presence, a single replicon, and the availability of genomic data—highlight its potential ecological versatility and adaptability. Understanding these characteristics can provide insights into its role in microbial communities and its interactions within various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. GM01
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. GM01 PMI17_contig_191.191, whole genome shotgun

Gene Summary

Adenine Count

1215689 bp

Thymine Count

1213126 bp

Guanine Count

1448225 bp

Cytosine Count

1443508 bp

Genome Length

5320548 bp

Protein-coding Genes

4826 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-2PMI17_01049A8AQ58Positive1054482 - 105717298093.4
ribosome-binding factor aPMI17_01050B2VGN3Positive1057238 - 105764515296.5
trna pseudouridine 55 synthasePMI17_01051A8G909Positive1057645 - 105858935208.4
polyribonucleotide nucleotidyltransferasePMI17_01054A7ZS61Positive1059303 - 106144177089.5
lipoprotein nlpi, contains tpr repeatsPMI17_01055B7NDE9Positive1061571 - 106245533701.7
dna/rna helicase, superfamily iiPMI17_01056Q8XA87Positive1062633 - 106452270164.1
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenasePMI17_01057Q49117Negative1064592 - 106533825706.1
dna-binding domain-containing protein, arac-typePMI17_01058Not AvailablePositive1065522 - 106643934147.4
luciferase family oxidoreductase, group 1PMI17_01059P0ADV6Negative1066443 - 106745336750.1
collagenase-like proteasePMI17_01060P45475Negative1067571 - 106845532856.4

Displaying genes 1151 – 1160 of 5017 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

321 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 321 metabolites

Health Effects

No health effects information available for this bacterium.