Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein uref | PMI16_03246 | A6SZ09 | Positive | 3616929 - 3617609 | 24638.6 |
| urease accessory protein ureg | PMI16_03247 | A6SZ10 | Positive | 3617680 - 3618315 | 22879.6 |
| hydrogenase/urease accessory protein | PMI16_03248 | P27650 | Positive | 3618384 - 3618998 | 20728.9 |
| transcriptional regulator containing an amidase domain and an arac-type dna-binding hth domain | PMI16_03249 | Q46855 | Negative | 3619288 - 3620184 | 33498.6 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI16_03250 | A0A1V6PAN1 | Positive | 3620340 - 3621320 | 34924.5 |
| deoxyribodipyrimidine photolyase | PMI16_03251 | Q55081 | Negative | 3621740 - 3623236 | 56264.4 |
| abc-type branched-chain amino acid transport system, atpase component | PMI16_03252 | Not Available | Negative | 3623356 - 3624084 | 25659.6 |
| abc-type branched-chain amino acid transport system, atpase component | PMI16_03253 | Not Available | Negative | 3624081 - 3624842 | 28170.4 |
| abc-type branched-chain amino acid transport system, permease component | PMI16_03254 | P21628 | Negative | 3624842 - 3625732 | 31735.7 |
| branched-chain amino acid abc-type transport system, permease component | PMI16_03255 | P0A2J2 | Negative | 3625737 - 3626618 | 30866.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



