Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-4-deoxyglucarate dehydratase | PMI16_03046 | A1TQC1 | Negative | 3411436 - 3412392 | 34427.5 |
| nad dependent epimerase/dehydratase family protein | PMI16_03047 | Q888H1 | Positive | 3412885 - 3413763 | 32285.9 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI16_03048 | P42200 | Positive | 3414232 - 3415014 | 28475.2 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI16_03049 | Not Available | Positive | 3415011 - 3415664 | 24474.7 |
| abc-type polar amino acid transport system, atpase component | PMI16_03050 | O34677 | Positive | 3415648 - 3416403 | 27351.3 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI16_03051 | Not Available | Positive | 3416455 - 3417261 | 29153.3 |
| pas domain s-box | PMI16_03052 | Not Available | Negative | 3417417 - 3417884 | 17318.9 |
| threonine dehydratase | PMI16_03053 | O59791 | Positive | 3418123 - 3419088 | 34574.6 |
| proline iminopeptidase | PMI16_03054 | O32449 | Positive | 3419140 - 3420117 | 36267.9 |
| nucleoside-diphosphate-sugar epimerase | PMI16_03055 | Not Available | Positive | 3420128 - 3421030 | 31862.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



