Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI16_02663 | Not Available | Negative | 2985778 - 2986218 | 16097.8 |
| pseudouridine synthase family protein | PMI16_02664 | Q9HX48 | Negative | 2986737 - 2987303 | 21594.0 |
| isocitrate dehydrogenase, nadp-dependent, prokaryotic type | PMI16_02665 | Q02NB5 | Positive | 2987570 - 2988823 | 45759.1 |
| cold shock protein | PMI16_02666 | P72366 | Negative | 2988964 - 2989173 | 7422.72 |
| hypothetical protein | PMI16_02667 | A4G7T9 | Positive | 2989516 - 2989830 | 11801.3 |
| atp-dependent clp protease atp-binding subunit clpa | PMI16_02668 | P0ABI1 | Positive | 2989827 - 2992133 | 84868.0 |
| peptidase family m48 | PMI16_02669 | Not Available | Negative | 2992348 - 2993439 | 38597.6 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase dut | PMI16_02670 | A6SW68 | Negative | 2993450 - 2993899 | 15802.2 |
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase | PMI16_02671 | Q9KVD1 | Negative | 2993927 - 2995135 | 43092.9 |
| lipoprotein signal peptidase | PMI16_02672 | A6SW70 | Negative | 2995215 - 2995724 | 18751.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



