Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. CF444 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1122358 bp
Thymine Count
1129611 bp
Guanine Count
1683412 bp
Cytosine Count
1659351 bp
Genome Length
5594732 bp
Protein-coding Genes
4974 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophanyl-trna synthetase | PMI16_02513 | Q46127 | Positive | 2792353 - 2793414 | 39363.1 |
| signal transduction histidine kinase | PMI16_02514 | Not Available | Negative | 2793468 - 2794898 | 52708.9 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI16_02515 | Not Available | Negative | 2794895 - 2795632 | 27599.3 |
| protein of unknown function (duf1520) | PMI16_02516 | Not Available | Positive | 2795831 - 2796355 | 19490.4 |
| rnd family efflux transporter, mfp subunit | PMI16_02517 | C9XVZ5 | Positive | 2796664 - 2798310 | 57279.8 |
| cation/multidrug efflux pump | PMI16_02518 | A8GHQ9 | Positive | 2798320 - 2801496 | 113604.0 |
| cation/multidrug efflux pump | PMI16_02519 | B2K9M1 | Positive | 2801519 - 2804740 | 115078.0 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | PMI16_02520 | Not Available | Positive | 2804763 - 2806226 | 52129.8 |
| aminodeoxychorismate synthase, component i | PMI16_02521 | P12679 | Negative | 2806266 - 2808140 | 68048.2 |
| drug resistance transporter, emrb/qaca subfamily | PMI16_02522 | Not Available | Positive | 2808335 - 2809759 | 50293.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



