Polaromonas sp. CF318

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Polaromonas

Description

Polaromonas sp. CF318 is a Gram-negative bacterium characterized by the presence of flagella, which facilitates its motility. This organism possesses a single replicon, suggesting a streamlined genomic structure that is often associated with adaptability in various environments. The genetic sequence for Polaromonas sp. CF318 can be accessed under the accession number AKIV00000000.1, which provides a basis for further research and comparative studies within the Polaromonas genus. The traits of Polaromonas sp. CF318 indicate its potential ecological roles, particularly in cold environments where this genus is commonly found. Gram-negative bacteria, like Polaromonas sp. CF318, typically have diverse metabolic capabilities, which can be advantageous in nutrient-poor conditions. The presence of flagella suggests that this species may be well-adapted to moving through liquid environments, possibly enhancing its ability to locate nutrients or evade unfavorable conditions. Overall, the characteristics of Polaromonas sp. CF318 highlight its potential significance in microbial ecology, particularly in cold habitats. Its motility and genomic structure may contribute to its survival and ecological interactions, underscoring the importance of studying such organisms in understanding microbial dynamics in extreme environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPolaromonas
SpeciesPolaromonas sp. CF318
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaromonas sp. CF318 PMI15_contig_278.278, whole genome shotgun

Gene Summary

Adenine Count

880902 bp

Thymine Count

874847 bp

Guanine Count

1627749 bp

Cytosine Count

1625318 bp

Genome Length

5008816 bp

Protein-coding Genes

4740 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPMI15_00047Not AvailablePositive46733 - 4798946641.1
membrane protein involved in the export of o-antigen and teichoic acidPMI15_00048Not AvailablePositive48002 - 4945051302.8
serine acetyltransferasePMI15_00049Q9ZK14Positive49486 - 4999818079.5
nucleoside-diphosphate-sugar epimerasePMI15_00050Q56623Positive50000 - 5186268471.0
putative nucleoside-diphosphate sugar epimerasePMI15_00051Not AvailablePositive51855 - 5273632571.5
acetylglutamate kinasePMI15_00052Q125B6Positive52827 - 5372331742.4
response regulator with chey-like receiver domain and winged-helix dna-binding domainPMI15_00053Not AvailablePositive53839 - 5454025372.8
signal transduction histidine kinasePMI15_00054Not AvailablePositive54552 - 5608754753.9
transcriptional regulatorPMI15_00055Q5QZB7Positive56250 - 5690023822.8
enolase superfamily enzyme related to l-alanine-dl-glutamate epimerasePMI15_00056A5V6Z0Negative57121 - 5833245281.0

Displaying genes 71 – 80 of 4809 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

320 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da

Displaying 1–10 of 320 metabolites

Health Effects

No health effects information available for this bacterium.