Sphingobium sp. AP49

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. AP49 is a bacterium characterized by the presence of flagella, which facilitate its motility. This feature is significant as it may enhance the organism's ability to navigate its environment, particularly in seeking out nutrients or avoiding unfavorable conditions. The genomic structure of Sphingobium sp. AP49 is notable for containing a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability. This simplicity in genomic architecture can be advantageous for rapid reproduction and response to environmental changes. The specific genetic information about Sphingobium sp. AP49 is cataloged under the accession number NZ_CP124576.1, which provides a reference point for researchers looking to study its genetic makeup or explore its metabolic capabilities further. From an ecological standpoint, the traits of Sphingobium sp. AP49 suggest potential roles in bioremediation or nutrient cycling within its habitat. The presence of flagella may allow it to colonize various substrates effectively, while its genomic characteristics may enable it to metabolize diverse organic compounds. Thus, Sphingobium sp. AP49 could contribute to the degradation of pollutants or the recycling of organic matter in its ecosystem, highlighting its importance in maintaining environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. AP49
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. AP49 chromosome, complete genome.

Gene Summary

Adenine Count

810255 bp

Thymine Count

809295 bp

Guanine Count

1440283 bp

Cytosine Count

1446355 bp

Genome Length

4506188 bp

Protein-coding Genes

4162 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dienelactone hydrolase family proteinPMI04_RS00220Not AvailablePositive49143 - 4984425618.3
quinone oxidoreductasePMI04_RS00225Not AvailablePositive49844 - 5081533521.1
phytanoyl-coa dioxygenase family proteinPMI04_RS00230Not AvailablePositive50953 - 5197838718.6
yjbe family putative metal transport proteinPMI04_RS00235Not AvailableNegative52015 - 5273425295.4
transcription termination factor rhoPMI04_RS00240Not AvailableNegative52851 - 5410746452.2
retroviral-like aspartic protease family proteinPMI04_RS00245Not AvailablePositive54388 - 5535334214.7
transglycosylase domain-containing proteinPMI04_RS00250Not AvailableNegative55368 - 5747675226.4
peptide-methionine (r)-s-oxide reductase msrbPMI04_RS00255Not AvailableNegative57589 - 5799014734.0
dna polymerase iii subunit deltaPMI04_RS00260Not AvailableNegative58022 - 5905036651.3
lps assembly lipoprotein lptePMI04_RS00265Not AvailableNegative59047 - 5956818201.7

Displaying genes 81 – 90 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.