Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. AP49 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
810255 bp
Thymine Count
809295 bp
Guanine Count
1440283 bp
Cytosine Count
1446355 bp
Genome Length
4506188 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | PMI04_RS00220 | Not Available | Positive | 49143 - 49844 | 25618.3 |
| quinone oxidoreductase | PMI04_RS00225 | Not Available | Positive | 49844 - 50815 | 33521.1 |
| phytanoyl-coa dioxygenase family protein | PMI04_RS00230 | Not Available | Positive | 50953 - 51978 | 38718.6 |
| yjbe family putative metal transport protein | PMI04_RS00235 | Not Available | Negative | 52015 - 52734 | 25295.4 |
| transcription termination factor rho | PMI04_RS00240 | Not Available | Negative | 52851 - 54107 | 46452.2 |
| retroviral-like aspartic protease family protein | PMI04_RS00245 | Not Available | Positive | 54388 - 55353 | 34214.7 |
| transglycosylase domain-containing protein | PMI04_RS00250 | Not Available | Negative | 55368 - 57476 | 75226.4 |
| peptide-methionine (r)-s-oxide reductase msrb | PMI04_RS00255 | Not Available | Negative | 57589 - 57990 | 14734.0 |
| dna polymerase iii subunit delta | PMI04_RS00260 | Not Available | Negative | 58022 - 59050 | 36651.3 |
| lps assembly lipoprotein lpte | PMI04_RS00265 | Not Available | Negative | 59047 - 59568 | 18201.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

