Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. AP49 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
810255 bp
Thymine Count
809295 bp
Guanine Count
1440283 bp
Cytosine Count
1446355 bp
Genome Length
4506188 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbj | PMI04_RS01660 | Not Available | Negative | 346517 - 347203 | 24435.2 |
| conjugal transfer protein trbe | PMI04_RS01665 | Not Available | Negative | 347200 - 349686 | 91241.9 |
| virb3 family type iv secretion system protein | PMI04_RS01670 | Not Available | Negative | 349683 - 349952 | 9726.91 |
| trbc/virb2 family protein | PMI04_RS01675 | Not Available | Negative | 349952 - 350254 | 10266.8 |
| p-type conjugative transfer atpase trbb | PMI04_RS01680 | Not Available | Negative | 350284 - 351270 | 35161.5 |
| sos response-associated peptidase | PMI04_RS01685 | Not Available | Negative | 351687 - 352331 | 23836.8 |
| sos response-associated peptidase family protein | PMI04_RS01690 | Not Available | Negative | 352455 - 353114 | 24375.6 |
| imua family protein | PMI04_RS01695 | Not Available | Positive | 353245 - 353973 | 25651.9 |
| duf6504 family protein | PMI04_RS01700 | Not Available | Positive | 353897 - 355438 | 55800.5 |
| error-prone dna polymerase | PMI04_RS01705 | Not Available | Positive | 355435 - 358788 | 123905.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

