Sphingobium sp. AP49

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. AP49 is a bacterium characterized by the presence of flagella, which facilitate its motility. This feature is significant as it may enhance the organism's ability to navigate its environment, particularly in seeking out nutrients or avoiding unfavorable conditions. The genomic structure of Sphingobium sp. AP49 is notable for containing a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability. This simplicity in genomic architecture can be advantageous for rapid reproduction and response to environmental changes. The specific genetic information about Sphingobium sp. AP49 is cataloged under the accession number NZ_CP124576.1, which provides a reference point for researchers looking to study its genetic makeup or explore its metabolic capabilities further. From an ecological standpoint, the traits of Sphingobium sp. AP49 suggest potential roles in bioremediation or nutrient cycling within its habitat. The presence of flagella may allow it to colonize various substrates effectively, while its genomic characteristics may enable it to metabolize diverse organic compounds. Thus, Sphingobium sp. AP49 could contribute to the degradation of pollutants or the recycling of organic matter in its ecosystem, highlighting its importance in maintaining environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. AP49
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. AP49 chromosome, complete genome.

Gene Summary

Adenine Count

810255 bp

Thymine Count

809295 bp

Guanine Count

1440283 bp

Cytosine Count

1446355 bp

Genome Length

4506188 bp

Protein-coding Genes

4162 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent siderophore receptorPMI04_RS00960Not AvailablePositive198140 - 201115105903.0
atp-dependent chaperone clpbPMI04_RS00965Not AvailableNegative201194 - 20377393537.0
m28 family metallopeptidasePMI04_RS00970Not AvailableNegative203882 - 20555258672.9
pitrilysin family proteinPMI04_RS00975Not AvailablePositive205741 - 208608101995.0
hypothetical proteinPMI04_RS00980Not AvailablePositive208632 - 20893410477.6
marr family winged helix-turn-helix transcriptional regulatorPMI04_RS00985Not AvailablePositive209036 - 20948516823.2
fusc family proteinPMI04_RS00990Not AvailablePositive209482 - 21157274668.6
duf1656 domain-containing proteinPMI04_RS00995Not AvailablePositive211569 - 2117847674.97
efflux rnd transporter periplasmic adaptor subunitPMI04_RS01000Not AvailablePositive211781 - 21268332386.9
efflux transporter outer membrane subunitPMI04_RS01005Not AvailablePositive212676 - 21411850137.8

Displaying genes 221 – 230 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.