Phycisphaera mikurensis NBRC 102666

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Phycisphaerae

Order

Phycisphaerales

Family

Phycisphaeraceae

Genus

Phycisphaera

Description

Phycisphaera mikurensis NBRC 102666 is a notable member of the phylum Planctomycetes, characterized by its unique cellular structure and ecological roles. This species possesses two replicons, which is a defining feature that contributes to its genetic organization and replication mechanisms. The genome of P. mikurensis is represented by two accessions: NC_017081.1 and NC_017080.1. These genomic sequences provide valuable insights into the genetic makeup of this organism, facilitating studies on its phylogenetic relationships within the Planctomycetes and its functional capabilities. As a member of a phylum known for its distinct characteristics, P. mikurensis may play significant roles in various ecosystems, particularly in aquatic environments where Planctomycetes are often abundant. The presence of multiple replicons suggests an adaptability that could be advantageous in fluctuating environmental conditions, although the specific implications of this trait for ecological interactions remain to be fully understood. In summary, Phycisphaera mikurensis NBRC 102666, with its two replicons and defined genomic accessions, exemplifies the complexity of microbial life and underscores the ecological significance of Planctomycetes in aquatic ecosystems. Further research on its metabolic pathways and ecological interactions may enhance our understanding of its role in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPhycisphaerae
OrderPhycisphaerales
FamilyPhycisphaeraceae
GenusPhycisphaera
SpeciesPhycisphaera mikurensis
StrainNBRC 102666

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phycisphaera mikurensis NBRC 102666 plasmid pPSMK1, complete

Gene Summary

Adenine Count

12453 bp

Thymine Count

11904 bp

Guanine Count

27842 bp

Cytosine Count

28958 bp

Genome Length

81157 bp

Protein-coding Genes

73 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligasePSMK_RS11985O33804Positive2976391 - 297771944529.1
phospho-n-acetylmuramoyl-pentapeptide- transferasePSMK_RS11990B5YFT8Positive2977716 - 297892143335.1
sdr family nad(p)-dependent oxidoreductasePSMK_RS11995P25145Positive2979049 - 297981326294.4
pilz domain-containing proteinPSMK_RS12000Not AvailableNegative2979965 - 298037214475.2
pilz domain-containing proteinPSMK_RS12005Not AvailableNegative2980712 - 298123018462.8
hypothetical proteinPSMK_RS12010Not AvailableNegative2981489 - 298223224597.6
nad(p)-binding domain-containing proteinPSMK_RS12015P50736Negative2982429 - 298488590193.3
peptidyl-prolyl cis-trans isomerasePSMK_RS12020Not AvailableNegative2984989 - 298626645923.3
transglutaminase family proteinPSMK_RS12025Q49757Negative2986282 - 298726834795.9
circularly permuted type 2 atp-grasp proteinPSMK_RS12030P9WL97Negative2987282 - 299007796760.4

Displaying genes 2481 – 2490 of 3164 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.