Phycisphaera mikurensis NBRC 102666

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Phycisphaerae

Order

Phycisphaerales

Family

Phycisphaeraceae

Genus

Phycisphaera

Description

Phycisphaera mikurensis NBRC 102666 is a notable member of the phylum Planctomycetes, characterized by its unique cellular structure and ecological roles. This species possesses two replicons, which is a defining feature that contributes to its genetic organization and replication mechanisms. The genome of P. mikurensis is represented by two accessions: NC_017081.1 and NC_017080.1. These genomic sequences provide valuable insights into the genetic makeup of this organism, facilitating studies on its phylogenetic relationships within the Planctomycetes and its functional capabilities. As a member of a phylum known for its distinct characteristics, P. mikurensis may play significant roles in various ecosystems, particularly in aquatic environments where Planctomycetes are often abundant. The presence of multiple replicons suggests an adaptability that could be advantageous in fluctuating environmental conditions, although the specific implications of this trait for ecological interactions remain to be fully understood. In summary, Phycisphaera mikurensis NBRC 102666, with its two replicons and defined genomic accessions, exemplifies the complexity of microbial life and underscores the ecological significance of Planctomycetes in aquatic ecosystems. Further research on its metabolic pathways and ecological interactions may enhance our understanding of its role in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPhycisphaerae
OrderPhycisphaerales
FamilyPhycisphaeraceae
GenusPhycisphaera
SpeciesPhycisphaera mikurensis
StrainNBRC 102666

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phycisphaera mikurensis NBRC 102666 plasmid pPSMK1, complete

Gene Summary

Adenine Count

12453 bp

Thymine Count

11904 bp

Guanine Count

27842 bp

Cytosine Count

28958 bp

Genome Length

81157 bp

Protein-coding Genes

73 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1559 domain-containing proteinPSMK_RS19350Not AvailablePositive1147306 - 114822932839.8
hypothetical proteinPSMK_RS04610Not AvailableNegative1148288 - 115003662442.4
duf5060 domain-containing proteinPSMK_RS04615Not AvailablePositive1150305 - 115214668529.1
dna glycosylase/dna-(apurinic or apyrimidinic site) lyasePSMK_RS04620Q8K203Negative1152261 - 115301927923.8
glycoside hydrolase family 2 tim barrel-domain containing proteinPSMK_RS04625Not AvailableNegative1153264 - 115505462652.4
type ii secretion system proteinPSMK_RS16255Not AvailableNegative1155106 - 115590028688.0
pep-cterm sorting domain-containing proteinPSMK_RS04635Not AvailableNegative1155990 - 115675726419.4
laci family dna-binding transcriptional regulatorPSMK_RS04640P46828Negative1156864 - 115786235823.8
taxi family trap transporter solute-binding subunitPSMK_RS04645Not AvailableNegative1158090 - 115950849613.8
Trna-thrNot AvailableNot AvailablePositive1159590 - 1159662Not Available

Displaying genes 1001 – 1010 of 3164 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.