Geodermatophilus siccatus

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus siccatus is an aerobic bacterium characterized by its cocci shape. This organism possesses true flagella, which contribute to its motility in various environments. Notably, G. siccatus has a single replicon, indicating a streamlined genomic structure that may be advantageous for its survival in specific ecological niches. The accession number FNHE00000000.1 is associated with the genomic data of G. siccatus, providing a reference point for further research and characterization of its genetic makeup. This information can be pivotal for understanding its metabolic pathways and ecological roles. Ecologically, G. siccatus is likely adapted to thrive in environments with limited water availability, as suggested by its designation and traits. Its ability to move via flagella may facilitate its colonization of various surfaces in such arid ecosystems. The aerobic nature of this bacterium implies it requires oxygen for its metabolic processes, which may limit its habitat to well-aerated locations. In summary, the combination of G. siccatus's aerobic lifestyle, cocci morphology, motility through flagella, and genomic simplicity highlights its potential role in specialized ecological niches, particularly those that are arid or nutrient-limited. Understanding its adaptations can provide insights into bacterial survival strategies in extreme environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus siccatus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus siccatus strain DSM 45419 genome assembly,

Gene Summary

Adenine Count

661483 bp

Thymine Count

660798 bp

Guanine Count

1946730 bp

Cytosine Count

1934357 bp

Genome Length

5206703 bp

Protein-coding Genes

4889 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding transcriptional regulator, lysr familySAMN05660642_00717Not AvailableNegative748636 - 74958033898.0
benzoate/toluate 1,2-dioxygenase alpha subunitSAMN05660642_00718Not AvailablePositive749825 - 75120151181.6
benzoate/toluate 1,2-dioxygenase beta subunitSAMN05660642_00719Not AvailablePositive751207 - 75175521584.4
benzoate/toluate 1,2-dioxygenase reductase subunitSAMN05660642_00720Not AvailablePositive751822 - 75459398351.9
aaa atpase domain-containing proteinSAMN05660642_00721Not AvailablePositive754577 - 757432101451.0
3-oxoadipate enol-lactonase/3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylaseSAMN05660642_00722Not AvailableNegative757481 - 7576877086.43
muconolactone delta-isomeraseSAMN05660642_00723Not AvailableNegative757684 - 7579208395.03
catechol 1,2-dioxygenaseSAMN05660642_00724Not AvailableNegative758017 - 75888631373.7
mfs transporter, aahs family, benzoate transport proteinSAMN05660642_00725Not AvailablePositive759501 - 76090447700.1
nucleotide-binding universal stress protein, uspa familySAMN05660642_00726Not AvailablePositive760980 - 76143816666.5

Displaying genes 721 – 730 of 4946 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.