Geodermatophilus siccatus

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus siccatus is an aerobic bacterium characterized by its cocci shape. This organism possesses true flagella, which contribute to its motility in various environments. Notably, G. siccatus has a single replicon, indicating a streamlined genomic structure that may be advantageous for its survival in specific ecological niches. The accession number FNHE00000000.1 is associated with the genomic data of G. siccatus, providing a reference point for further research and characterization of its genetic makeup. This information can be pivotal for understanding its metabolic pathways and ecological roles. Ecologically, G. siccatus is likely adapted to thrive in environments with limited water availability, as suggested by its designation and traits. Its ability to move via flagella may facilitate its colonization of various surfaces in such arid ecosystems. The aerobic nature of this bacterium implies it requires oxygen for its metabolic processes, which may limit its habitat to well-aerated locations. In summary, the combination of G. siccatus's aerobic lifestyle, cocci morphology, motility through flagella, and genomic simplicity highlights its potential role in specialized ecological niches, particularly those that are arid or nutrient-limited. Understanding its adaptations can provide insights into bacterial survival strategies in extreme environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus siccatus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus siccatus strain DSM 45419 genome assembly,

Gene Summary

Adenine Count

661483 bp

Thymine Count

660798 bp

Guanine Count

1946730 bp

Cytosine Count

1934357 bp

Genome Length

5206703 bp

Protein-coding Genes

4889 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
long-chain acyl-coa synthetaseSAMN05660642_04817Not AvailableNegative5048606 - 504992246528.2
glyoxylase, beta-lactamase superfamily iiSAMN05660642_04818Not AvailableNegative5049919 - 505079430289.1
hypothetical proteinSAMN05660642_04819Not AvailablePositive5050844 - 505136216987.4
murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domainSAMN05660642_04820Not AvailableNegative5051450 - 505281445931.2
valine dehydrogenase (nad+)SAMN05660642_04821Not AvailablePositive5053277 - 505434136793.6
ketosteroid isomerase-related proteinSAMN05660642_04822Not AvailablePositive5054433 - 505491517265.0
protein of unknown functionSAMN05660642_04823Not AvailablePositive5055108 - 50553328112.9
phosphoribosylformylglycinamidine cyclo-ligaseSAMN05660642_04824Not AvailableNegative5055466 - 505653036127.0
amidophosphoribosyltransferaseSAMN05660642_04825Not AvailableNegative5056527 - 505808054824.0
glyoxylase, beta-lactamase superfamily iiSAMN05660642_04826Not AvailableNegative5058235 - 505884321465.0

Displaying genes 4801 – 4810 of 4946 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.