Geodermatophilus siccatus

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus siccatus is an aerobic bacterium characterized by its cocci shape. This organism possesses true flagella, which contribute to its motility in various environments. Notably, G. siccatus has a single replicon, indicating a streamlined genomic structure that may be advantageous for its survival in specific ecological niches. The accession number FNHE00000000.1 is associated with the genomic data of G. siccatus, providing a reference point for further research and characterization of its genetic makeup. This information can be pivotal for understanding its metabolic pathways and ecological roles. Ecologically, G. siccatus is likely adapted to thrive in environments with limited water availability, as suggested by its designation and traits. Its ability to move via flagella may facilitate its colonization of various surfaces in such arid ecosystems. The aerobic nature of this bacterium implies it requires oxygen for its metabolic processes, which may limit its habitat to well-aerated locations. In summary, the combination of G. siccatus's aerobic lifestyle, cocci morphology, motility through flagella, and genomic simplicity highlights its potential role in specialized ecological niches, particularly those that are arid or nutrient-limited. Understanding its adaptations can provide insights into bacterial survival strategies in extreme environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus siccatus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus siccatus strain DSM 45419 genome assembly,

Gene Summary

Adenine Count

661483 bp

Thymine Count

660798 bp

Guanine Count

1946730 bp

Cytosine Count

1934357 bp

Genome Length

5206703 bp

Protein-coding Genes

4889 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-inositol-3-phosphate glycosyltransferaseSAMN05660642_04675Not AvailableNegative4905459 - 490681147816.1
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN05660642_04676Not AvailablePositive4906894 - 490767927369.6
udp-n-acetylmuramate dehydrogenaseSAMN05660642_04677Not AvailableNegative4908176 - 490918335708.4
hypothetical proteinSAMN05660642_04678Not AvailablePositive4909218 - 491009031618.6
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN05660642_04679Not AvailablePositive4910321 - 491145740593.1
predicted small metal-binding proteinSAMN05660642_04680Not AvailablePositive4911503 - 49116796514.64
tigr03083 family proteinSAMN05660642_04681Not AvailablePositive4911704 - 491247127330.3
methyltransferase domain-containing proteinSAMN05660642_04682Not AvailablePositive4912518 - 491338130556.5
o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domainSAMN05660642_04683Not AvailableNegative4913371 - 491388317345.7
phage shock protein c (pspc) family proteinSAMN05660642_04684Not AvailablePositive4913907 - 49141137562.56

Displaying genes 4661 – 4670 of 4946 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.