Geodermatophilus siccatus

Cocciaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus siccatus is an aerobic bacterium characterized by its cocci shape. This organism possesses true flagella, which contribute to its motility in various environments. Notably, G. siccatus has a single replicon, indicating a streamlined genomic structure that may be advantageous for its survival in specific ecological niches. The accession number FNHE00000000.1 is associated with the genomic data of G. siccatus, providing a reference point for further research and characterization of its genetic makeup. This information can be pivotal for understanding its metabolic pathways and ecological roles. Ecologically, G. siccatus is likely adapted to thrive in environments with limited water availability, as suggested by its designation and traits. Its ability to move via flagella may facilitate its colonization of various surfaces in such arid ecosystems. The aerobic nature of this bacterium implies it requires oxygen for its metabolic processes, which may limit its habitat to well-aerated locations. In summary, the combination of G. siccatus's aerobic lifestyle, cocci morphology, motility through flagella, and genomic simplicity highlights its potential role in specialized ecological niches, particularly those that are arid or nutrient-limited. Understanding its adaptations can provide insights into bacterial survival strategies in extreme environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus siccatus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus siccatus strain DSM 45419 genome assembly,

Gene Summary

Adenine Count

661483 bp

Thymine Count

660798 bp

Guanine Count

1946730 bp

Cytosine Count

1934357 bp

Genome Length

5206703 bp

Protein-coding Genes

4889 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidaseSAMN05660642_01468Not AvailablePositive1554575 - 155507217841.3
hypothetical proteinSAMN05660642_01469Not AvailablePositive1555156 - 155555414207.4
predicted oxidoreductaseSAMN05660642_01470Not AvailableNegative1555593 - 155648031911.2
mfs transporter, dha1 family, arabinose polymer transporterSAMN05660642_01471Not AvailableNegative1556510 - 155771240074.9
threonine dehydrogenaseSAMN05660642_01472Not AvailableNegative1557910 - 155909142155.6
murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domainSAMN05660642_01473Not AvailablePositive1559382 - 156034433039.8
cobalt-zinc-cadmium efflux system proteinSAMN05660642_01474Not AvailablePositive1560525 - 156144831149.7
putative copper resistance protein dSAMN05660642_01475Not AvailablePositive1561557 - 156251334846.0
hypothetical proteinSAMN05660642_01476Not AvailablePositive1562574 - 156307718254.7
sugar phosphate permeaseSAMN05660642_01477Not AvailablePositive1563074 - 156431840089.8

Displaying genes 1471 – 1480 of 4946 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.