Xanthomarina gelatinilytica

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Xanthomarina

Description

Xanthomarina gelatinilytica is a marine bacterium distinguished by its single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in marine environments. This organism is catalogued under the accession number DPRK00000000.1, providing a reference point for genomic studies and further taxonomic classification. The presence of a single replicon suggests that X. gelatinilytica may exhibit certain efficiencies in replication and gene regulation compared to bacteria with multiple replicons. This trait could be advantageous in fluctuating marine ecosystems, where rapid response to environmental changes is crucial for survival. Xanthomarina gelatinilytica is likely involved in the marine ecosystem, potentially playing roles in nutrient cycling or interactions with other microorganisms. Its gelatinolytic capabilities suggest it may contribute to the degradation of organic matter in marine environments, thereby influencing the availability of nutrients for other organisms. This aspect of its biology highlights the interconnectedness of marine microbial communities and the importance of bacteria like X. gelatinilytica in maintaining ecological balance. Understanding the specific roles of such bacteria can provide insights into the functioning of marine ecosystems and the potential impacts of environmental changes on microbial diversity and activity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusXanthomarina
SpeciesXanthomarina gelatinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Xanthomarina gelatinilytica isolate UBA10227

Gene Summary

Adenine Count

1018569 bp

Thymine Count

1001733 bp

Guanine Count

557921 bp

Cytosine Count

545740 bp

Genome Length

3260631 bp

Protein-coding Genes

3389 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDHV22_04785Not AvailablePositive824556 - 82482310212.7
hypothetical proteinDHV22_04790Not AvailablePositive825001 - 82538214031.7
hypothetical proteinDHV22_04800Not AvailablePositive825810 - 829059121923.0
glycerophosphodiester phosphodiesteraseDHV22_04810Not AvailableNegative830357 - 83104625847.3
acyl-coa thioesterase iiDHV22_04815Not AvailableNegative831075 - 83193832373.6
peptide-methionine (s)-s-oxide reductaseDHV22_04825Not AvailableNegative832841 - 83319113538.9
amidophosphoribosyltransferaseDHV22_04830Not AvailableNegative833192 - 83351412488.1
hypothetical proteinDHV22_04835Not AvailablePositive833793 - 83467733225.9
glycine--trna ligaseDHV22_04840Not AvailablePositive834741 - 83591845719.2
glycine--trna ligaseDHV22_04845Not AvailablePositive836085 - 83638711752.1

Displaying genes 911 – 920 of 3442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.