Xanthomarina gelatinilytica

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Xanthomarina

Description

Xanthomarina gelatinilytica is a marine bacterium distinguished by its single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in marine environments. This organism is catalogued under the accession number DPRK00000000.1, providing a reference point for genomic studies and further taxonomic classification. The presence of a single replicon suggests that X. gelatinilytica may exhibit certain efficiencies in replication and gene regulation compared to bacteria with multiple replicons. This trait could be advantageous in fluctuating marine ecosystems, where rapid response to environmental changes is crucial for survival. Xanthomarina gelatinilytica is likely involved in the marine ecosystem, potentially playing roles in nutrient cycling or interactions with other microorganisms. Its gelatinolytic capabilities suggest it may contribute to the degradation of organic matter in marine environments, thereby influencing the availability of nutrients for other organisms. This aspect of its biology highlights the interconnectedness of marine microbial communities and the importance of bacteria like X. gelatinilytica in maintaining ecological balance. Understanding the specific roles of such bacteria can provide insights into the functioning of marine ecosystems and the potential impacts of environmental changes on microbial diversity and activity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusXanthomarina
SpeciesXanthomarina gelatinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Xanthomarina gelatinilytica isolate UBA10227

Gene Summary

Adenine Count

1018569 bp

Thymine Count

1001733 bp

Guanine Count

557921 bp

Cytosine Count

545740 bp

Genome Length

3260631 bp

Protein-coding Genes

3389 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
homogentisate 1,2-dioxygenaseDHV22_18075Not AvailableNegative3126523 - 312768344729.8
patatinDHV22_18080Not AvailableNegative3127944 - 313013081887.7
excinuclease abc subunit cDHV22_18085Not AvailableNegative3130172 - 313170959298.5
peptidaseDHV22_18095Not AvailablePositive3132289 - 313270816024.4
30s ribosomal protein s6--l-glutamate ligaseDHV22_18100Not AvailablePositive3132738 - 313361031830.2
succinylglutamate desuccinylaseDHV22_18105Not AvailablePositive3133610 - 313458435984.0
5-formyltetrahydrofolate cyclo-ligaseDHV22_18110Not AvailablePositive3134591 - 313515421582.9
lipoprotein signal peptidaseDHV22_18115Not AvailableNegative3135155 - 313577523553.9
hypothetical proteinDHV22_18120Not AvailableNegative3135862 - 313635317809.1
molecular chaperone dnakDHV22_18125Not AvailableNegative3136661 - 313704414519.4

Displaying genes 3301 – 3310 of 3442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.