Xanthomarina gelatinilytica

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Xanthomarina

Description

Xanthomarina gelatinilytica is a marine bacterium distinguished by its single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in marine environments. This organism is catalogued under the accession number DPRK00000000.1, providing a reference point for genomic studies and further taxonomic classification. The presence of a single replicon suggests that X. gelatinilytica may exhibit certain efficiencies in replication and gene regulation compared to bacteria with multiple replicons. This trait could be advantageous in fluctuating marine ecosystems, where rapid response to environmental changes is crucial for survival. Xanthomarina gelatinilytica is likely involved in the marine ecosystem, potentially playing roles in nutrient cycling or interactions with other microorganisms. Its gelatinolytic capabilities suggest it may contribute to the degradation of organic matter in marine environments, thereby influencing the availability of nutrients for other organisms. This aspect of its biology highlights the interconnectedness of marine microbial communities and the importance of bacteria like X. gelatinilytica in maintaining ecological balance. Understanding the specific roles of such bacteria can provide insights into the functioning of marine ecosystems and the potential impacts of environmental changes on microbial diversity and activity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusXanthomarina
SpeciesXanthomarina gelatinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Xanthomarina gelatinilytica isolate UBA10227

Gene Summary

Adenine Count

1018569 bp

Thymine Count

1001733 bp

Guanine Count

557921 bp

Cytosine Count

545740 bp

Genome Length

3260631 bp

Protein-coding Genes

3389 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phage holin family proteinDHV22_14340Not AvailablePositive2470222 - 247056312343.3
trigger factorDHV22_14345Not AvailablePositive2470649 - 247196850269.6
atp-dependent clp protease proteolytic subunitDHV22_14350Not AvailablePositive2472098 - 247268521641.3
atp-dependent clp protease atp-binding subunit clpxDHV22_14355Not AvailablePositive2472946 - 247399438939.3
atp-dependent clp protease atp-binding subunit clpxDHV22_14360Not AvailablePositive2474073 - 24742948209.91
hypothetical proteinDHV22_14365Not AvailableNegative2474363 - 24745456642.19
hypothetical proteinDHV22_14370Not AvailableNegative2474716 - 247623658623.5
duf2797 domain-containing proteinDHV22_14375Not AvailablePositive2476452 - 247724630795.8
asma family proteinDHV22_14380Not AvailableNegative2477243 - 247989496898.4
hypothetical proteinDHV22_14385Not AvailablePositive2480036 - 24801574433.22

Displaying genes 2621 – 2630 of 3442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.