Xanthomarina gelatinilytica

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Xanthomarina

Description

Xanthomarina gelatinilytica is a marine bacterium distinguished by its single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in marine environments. This organism is catalogued under the accession number DPRK00000000.1, providing a reference point for genomic studies and further taxonomic classification. The presence of a single replicon suggests that X. gelatinilytica may exhibit certain efficiencies in replication and gene regulation compared to bacteria with multiple replicons. This trait could be advantageous in fluctuating marine ecosystems, where rapid response to environmental changes is crucial for survival. Xanthomarina gelatinilytica is likely involved in the marine ecosystem, potentially playing roles in nutrient cycling or interactions with other microorganisms. Its gelatinolytic capabilities suggest it may contribute to the degradation of organic matter in marine environments, thereby influencing the availability of nutrients for other organisms. This aspect of its biology highlights the interconnectedness of marine microbial communities and the importance of bacteria like X. gelatinilytica in maintaining ecological balance. Understanding the specific roles of such bacteria can provide insights into the functioning of marine ecosystems and the potential impacts of environmental changes on microbial diversity and activity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusXanthomarina
SpeciesXanthomarina gelatinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Xanthomarina gelatinilytica isolate UBA10227

Gene Summary

Adenine Count

1018569 bp

Thymine Count

1001733 bp

Guanine Count

557921 bp

Cytosine Count

545740 bp

Genome Length

3260631 bp

Protein-coding Genes

3389 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDHV22_11585Not AvailableNegative2000988 - 200133513293.9
peptidase m19DHV22_11590Not AvailablePositive2001490 - 200180811987.4
6-pyruvoyl tetrahydrobiopterin synthaseDHV22_11595Not AvailableNegative2001809 - 200210711524.4
isopentenyl-diphosphate delta-isomeraseDHV22_11600Not AvailableNegative2002104 - 200263120694.7
peptide chain release factor 3DHV22_11605Not AvailablePositive2002758 - 200434760339.2
(4fe-4s)-binding proteinDHV22_11610Not AvailablePositive2004491 - 20047248674.4
duf3467 domain-containing proteinDHV22_11615Not AvailableNegative2005122 - 200541510991.2
dna-directed rna polymerase subunit beta'DHV22_11620Not AvailableNegative2005496 - 2008867124047.0
hypothetical proteinDHV22_11625Not AvailableNegative2009024 - 20092117360.33
dna-directed rna polymerase subunit beta'DHV22_11630Not AvailableNegative2009323 - 201009329913.2

Displaying genes 2121 – 2130 of 3442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.