Xanthomarina gelatinilytica

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Xanthomarina

Description

Xanthomarina gelatinilytica is a marine bacterium distinguished by its single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in marine environments. This organism is catalogued under the accession number DPRK00000000.1, providing a reference point for genomic studies and further taxonomic classification. The presence of a single replicon suggests that X. gelatinilytica may exhibit certain efficiencies in replication and gene regulation compared to bacteria with multiple replicons. This trait could be advantageous in fluctuating marine ecosystems, where rapid response to environmental changes is crucial for survival. Xanthomarina gelatinilytica is likely involved in the marine ecosystem, potentially playing roles in nutrient cycling or interactions with other microorganisms. Its gelatinolytic capabilities suggest it may contribute to the degradation of organic matter in marine environments, thereby influencing the availability of nutrients for other organisms. This aspect of its biology highlights the interconnectedness of marine microbial communities and the importance of bacteria like X. gelatinilytica in maintaining ecological balance. Understanding the specific roles of such bacteria can provide insights into the functioning of marine ecosystems and the potential impacts of environmental changes on microbial diversity and activity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusXanthomarina
SpeciesXanthomarina gelatinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Xanthomarina gelatinilytica isolate UBA10227

Gene Summary

Adenine Count

1018569 bp

Thymine Count

1001733 bp

Guanine Count

557921 bp

Cytosine Count

545740 bp

Genome Length

3260631 bp

Protein-coding Genes

3389 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aldo/keto reductaseDHV22_08380Not AvailableNegative1449010 - 144982130302.0
aldo/keto reductaseDHV22_08385Not AvailableNegative1449950 - 14501939224.92
exodeoxyribonuclease iiiDHV22_08395Not AvailableNegative1451584 - 145235729746.3
alkaline phosphataseDHV22_08405Not AvailableNegative1454832 - 145540121323.7
abc transporter permeaseDHV22_08410Not AvailablePositive1455512 - 14556997044.96
abc transporter permeaseDHV22_08415Not AvailablePositive1455800 - 145636120281.5
abc transporter atp-binding proteinDHV22_08420Not AvailablePositive1456361 - 145702724770.0
abc transporter atp-binding proteinDHV22_08425Not AvailablePositive1457097 - 14572134617.43
duf389 domain-containing proteinDHV22_08430Not AvailableNegative1457270 - 145875756195.5
mannose-1-phosphate guanylyltransferaseDHV22_08435Not AvailableNegative1458846 - 145992541466.5

Displaying genes 1531 – 1540 of 3442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.