Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Xanthomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Xanthomarina |
| Species | Xanthomarina gelatinilytica |
| Strain | AK20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
981558 bp
Thymine Count
993067 bp
Guanine Count
542340 bp
Cytosine Count
538519 bp
Genome Length
3055484 bp
Protein-coding Genes
2841 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | D778_00274 | Not Available | Positive | 1863036 - 1864310 | 47117.6 |
| tripeptidyl aminopeptidase precursor | D778_00275 | Not Available | Positive | 1864328 - 1865641 | 50725.8 |
| ornithine cyclodeaminase | D778_00276 | Not Available | Positive | 1865754 - 1866713 | 35353.5 |
| not a proline racemase, nor 4-hydroxyproline epimerase | D778_00277 | Not Available | Positive | 1866706 - 1867773 | 39662.2 |
| xaa-pro aminopeptidase | D778_00278 | Not Available | Negative | 1867765 - 1869063 | 49393.4 |
| d-amino acid dehydrogenase family protein in hydroxy-l-proline catabolic cluster | D778_00279 | Not Available | Negative | 1869066 - 1870313 | 45673.2 |
| hypothetical protein | D778_00280 | Not Available | Positive | 1870374 - 1870487 | 4287.39 |
| 4-hydroxyproline epimerase | D778_00281 | Not Available | Negative | 1870749 - 1871759 | 37157.3 |
| ketoglutarate semialdehyde dehydrogenase | D778_00282 | Not Available | Negative | 1871761 - 1873344 | 56865.9 |
| 1-pyrroline-4-hydroxy-2-carboxylate deaminase | D778_00283 | Not Available | Negative | 1873449 - 1874423 | 36066.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
