Calothrix sp. HK-06

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Calotrichaceae

Genus

Calothrix

Description

Calothrix sp. HK-06 is characterized by having a single replicon, which suggests a streamlined genomic organization. The genome of this strain is accessible under the accession number MRCD00000000.1. Calothrix is a genus of cyanobacteria, which are known for their ability to perform photosynthesis and contribute to nitrogen fixation. These traits are essential for their ecological roles, particularly in aquatic environments where they can influence nutrient cycling and primary production. The presence of a single replicon may indicate a level of genomic simplicity that can be advantageous in specific ecological niches, allowing for efficient regulation of essential functions. In conclusion, the unique characteristics of Calothrix sp. HK-06, particularly its genomic structure and the implications of its single replicon, provide insights into its potential ecological roles and adaptations within its environment. Its capacity for photosynthesis and nitrogen fixation suggests that it may be important in maintaining the balance of nutrients in its habitat, contributing to the overall health of the ecosystem.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyCalotrichaceae
GenusCalothrix
SpeciesCalothrix sp. HK-06
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Calothrix sp. HK-06
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calothrix sp. HK-06 NIES-2101_Scaffold_244, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan-binding proteinNIES2101_14385Not AvailablePositive3275832 - 327630217235.7
sodium:calcium exchangerNIES2101_14390Not AvailablePositive3276447 - 327878985124.6
rna-binding protein hfqNIES2101_14395Not AvailableNegative3278829 - 32790448025.86
diaminopimelate epimeraseNIES2101_14400Not AvailablePositive3279101 - 327994030398.6
hypothetical proteinNIES2101_14405Not AvailableNegative3280511 - 328084611857.1
mvdc family atp-grasp ribosomal peptide maturaseNIES2101_14410Not AvailableNegative3280877 - 328190839366.4
serine endopeptidase inhibitorNIES2101_14415Not AvailableNegative3282054 - 328235911360.2
hypothetical proteinNIES2101_14420Not AvailableNegative3282402 - 328274611548.8
hypothetical proteinNIES2101_14425Not AvailableNegative3282983 - 328333312246.6
hypothetical proteinNIES2101_14430Not AvailableNegative3283675 - 32838937480.78

Displaying genes 2721 – 2730 of 8210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.