Calothrix sp. HK-06

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Calotrichaceae

Genus

Calothrix

Description

Calothrix sp. HK-06 is characterized by having a single replicon, which suggests a streamlined genomic organization. The genome of this strain is accessible under the accession number MRCD00000000.1. Calothrix is a genus of cyanobacteria, which are known for their ability to perform photosynthesis and contribute to nitrogen fixation. These traits are essential for their ecological roles, particularly in aquatic environments where they can influence nutrient cycling and primary production. The presence of a single replicon may indicate a level of genomic simplicity that can be advantageous in specific ecological niches, allowing for efficient regulation of essential functions. In conclusion, the unique characteristics of Calothrix sp. HK-06, particularly its genomic structure and the implications of its single replicon, provide insights into its potential ecological roles and adaptations within its environment. Its capacity for photosynthesis and nitrogen fixation suggests that it may be important in maintaining the balance of nutrients in its habitat, contributing to the overall health of the ecosystem.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyCalotrichaceae
GenusCalothrix
SpeciesCalothrix sp. HK-06
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Calothrix sp. HK-06
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calothrix sp. HK-06 NIES-2101_Scaffold_244, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-l-fucosidaseNIES2101_11755Not AvailablePositive2677928 - 267861125467.2
peptidaseNIES2101_11760Not AvailablePositive2678706 - 267916416239.3
adenosylcobinamide-gdp ribazoletransferaseNIES2101_11765Not AvailableNegative2679186 - 267996228172.2
trna guanosine(34) transglycosylase tgtNIES2101_11775Not AvailablePositive2680908 - 268205942542.2
photosystem ii reaction center protein kNIES2101_11780Not AvailablePositive2682218 - 26823555116.5
iron abc transporter substrate-binding proteinNIES2101_11785Not AvailablePositive2682510 - 268280910897.4
photosystem ii reaction center protein psbmNIES2101_11790Not AvailablePositive2682906 - 26830254257.27
universal stress protein uspaNIES2101_11795Not AvailableNegative2683071 - 268395831858.7
peptidase m3NIES2101_11800Not AvailableNegative2684622 - 268672778232.5
hypothetical proteinNIES2101_11805Not AvailablePositive2687020 - 268728010288.5

Displaying genes 2231 – 2240 of 8210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.