Calothrix sp. HK-06

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Calotrichaceae

Genus

Calothrix

Description

Calothrix sp. HK-06 is characterized by having a single replicon, which suggests a streamlined genomic organization. The genome of this strain is accessible under the accession number MRCD00000000.1. Calothrix is a genus of cyanobacteria, which are known for their ability to perform photosynthesis and contribute to nitrogen fixation. These traits are essential for their ecological roles, particularly in aquatic environments where they can influence nutrient cycling and primary production. The presence of a single replicon may indicate a level of genomic simplicity that can be advantageous in specific ecological niches, allowing for efficient regulation of essential functions. In conclusion, the unique characteristics of Calothrix sp. HK-06, particularly its genomic structure and the implications of its single replicon, provide insights into its potential ecological roles and adaptations within its environment. Its capacity for photosynthesis and nitrogen fixation suggests that it may be important in maintaining the balance of nutrients in its habitat, contributing to the overall health of the ecosystem.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyCalotrichaceae
GenusCalothrix
SpeciesCalothrix sp. HK-06
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Calothrix sp. HK-06
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calothrix sp. HK-06 NIES-2101_Scaffold_244, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
group 3/4 sigma-70 rna polymerase sigma factorNIES2101_11335Not AvailableNegative2588194 - 258939045844.8
peptidase c14NIES2101_11340Not AvailablePositive2590023 - 259211977195.4
histidine kinaseNIES2101_11345Not AvailableNegative2592143 - 259303033333.5
hypothetical proteinNIES2101_11350Not AvailablePositive2593161 - 25933918891.76
caax protease family proteinNIES2101_11355Not AvailableNegative2593763 - 259470135462.9
hypothetical proteinNIES2101_11360Not AvailableNegative2594813 - 259569732146.6
hypothetical proteinNIES2101_11365Not AvailablePositive2595828 - 259608810223.9
glutathione s-transferaseNIES2101_11370Not AvailableNegative2596085 - 259674725506.8
short chain dehydrogenaseNIES2101_11375Not AvailableNegative2596807 - 259755027031.6
glutathione s-transferaseNIES2101_11380Not AvailableNegative2597562 - 259830228268.2

Displaying genes 2151 – 2160 of 8210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.