Calothrix sp. HK-06

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Calotrichaceae

Genus

Calothrix

Description

Calothrix sp. HK-06 is characterized by having a single replicon, which suggests a streamlined genomic organization. The genome of this strain is accessible under the accession number MRCD00000000.1. Calothrix is a genus of cyanobacteria, which are known for their ability to perform photosynthesis and contribute to nitrogen fixation. These traits are essential for their ecological roles, particularly in aquatic environments where they can influence nutrient cycling and primary production. The presence of a single replicon may indicate a level of genomic simplicity that can be advantageous in specific ecological niches, allowing for efficient regulation of essential functions. In conclusion, the unique characteristics of Calothrix sp. HK-06, particularly its genomic structure and the implications of its single replicon, provide insights into its potential ecological roles and adaptations within its environment. Its capacity for photosynthesis and nitrogen fixation suggests that it may be important in maintaining the balance of nutrients in its habitat, contributing to the overall health of the ecosystem.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyCalotrichaceae
GenusCalothrix
SpeciesCalothrix sp. HK-06
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Calothrix sp. HK-06
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calothrix sp. HK-06 NIES-2101_Scaffold_244, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
guanine permeaseNIES2101_10865Not AvailableNegative2483296 - 248469349451.6
hypothetical proteinNIES2101_10870Not AvailableNegative2484901 - 24852039772.48
nhlp family bacteriocin export abc transporter peptidase/permease/atpase subunitNIES2101_10875Not AvailableNegative2485622 - 248784781958.1
nhlp bacteriocin system secretion proteinNIES2101_10880Not AvailableNegative2487854 - 248946160278.2
hypothetical proteinNIES2101_10885Not AvailableNegative2489895 - 249044019398.2
hypothetical proteinNIES2101_10890Not AvailableNegative2490546 - 249131628196.6
chase2 sensor proteinNIES2101_10895Not AvailableNegative2491313 - 249363186924.1
hypothetical proteinNIES2101_10900Not AvailableNegative2493700 - 249485744443.7
group 3/4 sigma-70 rna polymerase sigma factorNIES2101_10905Not AvailableNegative2494868 - 249606446327.9
site-2 protease family proteinNIES2101_10910Not AvailablePositive2496422 - 249702122435.0

Displaying genes 2061 – 2070 of 8210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.