Calothrix sp. HK-06

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Calotrichaceae

Genus

Calothrix

Description

Calothrix sp. HK-06 is characterized by having a single replicon, which suggests a streamlined genomic organization. The genome of this strain is accessible under the accession number MRCD00000000.1. Calothrix is a genus of cyanobacteria, which are known for their ability to perform photosynthesis and contribute to nitrogen fixation. These traits are essential for their ecological roles, particularly in aquatic environments where they can influence nutrient cycling and primary production. The presence of a single replicon may indicate a level of genomic simplicity that can be advantageous in specific ecological niches, allowing for efficient regulation of essential functions. In conclusion, the unique characteristics of Calothrix sp. HK-06, particularly its genomic structure and the implications of its single replicon, provide insights into its potential ecological roles and adaptations within its environment. Its capacity for photosynthesis and nitrogen fixation suggests that it may be important in maintaining the balance of nutrients in its habitat, contributing to the overall health of the ecosystem.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyCalotrichaceae
GenusCalothrix
SpeciesCalothrix sp. HK-06
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Calothrix sp. HK-06
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calothrix sp. HK-06 NIES-2101_Scaffold_244, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome small subunit-dependent gtpase aNIES2101_06515Not AvailableNegative1529416 - 153048339739.4
sira-like domain-containing proteinNIES2101_06520Not AvailableNegative1530496 - 15307509287.15
molecular chaperone dnajNIES2101_06525Not AvailableNegative1530758 - 153190041549.1
molecular chaperone dnakNIES2101_06530Not AvailableNegative1532353 - 153431170693.9
nucleotide exchange factor grpeNIES2101_06535Not AvailableNegative1534560 - 153523124687.5
general secretion pathway protein gspeNIES2101_06540Not AvailablePositive1535469 - 153748474627.8
twitching motility protein piltNIES2101_06545Not AvailablePositive1537520 - 153863840908.6
pilus assembly protein pilcNIES2101_06550Not AvailablePositive1538741 - 153996144501.0
hypothetical proteinNIES2101_06555Not AvailablePositive1540030 - 154056920751.2
hypothetical proteinNIES2101_06560Not AvailableNegative1540615 - 154102814767.9

Displaying genes 1251 – 1260 of 8210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.