Plasticicumulans lactativorans str. DSM 25287

sphereaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Competibacterales

Family

Candidatus Competibacteraceae

Genus

Plasticicumulans

Description

Plasticicumulans lactativorans str. DSM 25287 is a Gram-negative, aerobic bacterium characterized by its spherical shape. It thrives optimally at a temperature of 37°C and falls within the mesophilic temperature range. The strain possesses a single replicon, which is indicative of its genomic structure. The designation DSM 25287 is associated with a specific accession number, SLWY00000000.1, which facilitates its identification within microbial databases. The aerobic nature of P. lactativorans suggests its reliance on oxygen for metabolic processes, which is typical for many bacteria that inhabit well-aerated environments. From a biological and ecological perspective, the characteristics of Plasticicumulans lactativorans may indicate a role in the degradation of plastic materials, as suggested by its genus name. This trait positions it potentially as a candidate for bioremediation applications, highlighting its significance in addressing environmental concerns related to plastic waste. By understanding the specific conditions under which it flourishes, researchers can explore its applications in sustainable waste management and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCompetibacterales
FamilyCandidatus Competibacteraceae
GenusPlasticicumulans
SpeciesPlasticicumulans lactativorans
StrainDSM 25287

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Plasticicumulans lactativorans strain DSM 25287 Ga0310538_161,

Gene Summary

Adenine Count

646449 bp

Thymine Count

648124 bp

Guanine Count

1556874 bp

Cytosine Count

1545462 bp

Genome Length

4397582 bp

Protein-coding Genes

3845 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazolonepropionaseEV699_103204Not AvailablePositive740520 - 74177343650.6
beta-lactamase class aEV699_103205Not AvailableNegative741790 - 74279136092.9
peptide chain release factor 3 (brf-3)EV699_103206Not AvailablePositive742927 - 74451959276.0
cupredoxin-like proteinEV699_103207Not AvailablePositive744678 - 74501912211.6
high-affinity iron transporterEV699_103208Not AvailablePositive745053 - 74589230662.1
n-acetyl-gamma-glutamyl-phosphate reductaseEV699_103209Not AvailablePositive745999 - 74695233716.5
crotonobetainyl-coa:carnitine coa-transferase caib-like acyl-coa transferaseEV699_103210Not AvailableNegative746956 - 74814941856.2
putative radical sam protein ygiqEV699_103211Not AvailablePositive748294 - 75053482411.7
hypothetical proteinEV699_103212Not AvailableNegative750550 - 7507235916.33
tetrapyrrole methylase family protein/mazg family protein/atp diphosphataseEV699_103213Not AvailablePositive750752 - 75153128731.1

Displaying genes 691 – 700 of 3930 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da
BASm0004925UDP-N-acetyl-alpha-D-muramateC20H28N3O19P2Chemical structure of UDP-N-acetyl-alpha-D-muramateNot available
Average676.395Da
Monoisotopic676.080870429Da

Displaying 1–7 of 7 metabolites

Health Effects

No health effects information available for this bacterium.