Plasticicumulans lactativorans str. DSM 25287

sphereaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Competibacterales

Family

Candidatus Competibacteraceae

Genus

Plasticicumulans

Description

Plasticicumulans lactativorans str. DSM 25287 is a Gram-negative, aerobic bacterium characterized by its spherical shape. It thrives optimally at a temperature of 37°C and falls within the mesophilic temperature range. The strain possesses a single replicon, which is indicative of its genomic structure. The designation DSM 25287 is associated with a specific accession number, SLWY00000000.1, which facilitates its identification within microbial databases. The aerobic nature of P. lactativorans suggests its reliance on oxygen for metabolic processes, which is typical for many bacteria that inhabit well-aerated environments. From a biological and ecological perspective, the characteristics of Plasticicumulans lactativorans may indicate a role in the degradation of plastic materials, as suggested by its genus name. This trait positions it potentially as a candidate for bioremediation applications, highlighting its significance in addressing environmental concerns related to plastic waste. By understanding the specific conditions under which it flourishes, researchers can explore its applications in sustainable waste management and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCompetibacterales
FamilyCandidatus Competibacteraceae
GenusPlasticicumulans
SpeciesPlasticicumulans lactativorans
StrainDSM 25287

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Plasticicumulans lactativorans strain DSM 25287 Ga0310538_161,

Gene Summary

Adenine Count

646449 bp

Thymine Count

648124 bp

Guanine Count

1556874 bp

Cytosine Count

1545462 bp

Genome Length

4397582 bp

Protein-coding Genes

3845 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilz domain-containing proteinEV699_10683Not AvailableNegative1360349 - 136144339606.2
dna polymerase iii alpha subunitEV699_10684Not AvailableNegative1361487 - 1364993128057.0
trna g18 (ribose-2'-o)-methylase spouEV699_10685Not AvailablePositive1365157 - 136595428173.9
pas/pac sensor signal transduction histidine kinaseEV699_10686Not AvailablePositive1366022 - 136786666795.9
two-component system cell cycle response regulator divkEV699_10687Not AvailablePositive1367870 - 136825613910.9
diguanylate cyclase (ggdef)-like proteinEV699_10688Not AvailablePositive1368275 - 1371628121104.0
rnase hiiEV699_10689Not AvailableNegative1371625 - 137224221213.7
glycine/d-amino acid oxidase-like deaminating enzymeEV699_10690Not AvailableNegative1372301 - 137348241959.9
xre family transcriptional regulatorEV699_10691Not AvailablePositive1373592 - 137426324363.9
acetolactate synthase large subunitEV699_10692Not AvailablePositive1374260 - 137593358502.1

Displaying genes 1261 – 1270 of 3930 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da
BASm0004925UDP-N-acetyl-alpha-D-muramateC20H28N3O19P2Chemical structure of UDP-N-acetyl-alpha-D-muramateNot available
Average676.395Da
Monoisotopic676.080870429Da

Displaying 1–7 of 7 metabolites

Health Effects

No health effects information available for this bacterium.