Rhizobium phaseoli Ch24-10

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium phaseoli Ch24-10 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species is notable for its genomic structure, possessing two replicons, which may contribute to its adaptability in various environments. The bacterium can be referenced through its accession numbers AHJU00000000.2 and NZ_CM003278.1, indicating its genetic information is documented in public databases, facilitating further research and study. In ecological terms, Rhizobium phaseoli plays a significant role in symbiotic nitrogen fixation, particularly with leguminous plants. This interaction is crucial for nutrient cycling in agricultural ecosystems, as it enhances soil fertility and promotes plant growth. The ability of Rhizobium species to establish symbiotic relationships with host plants underscores their importance in sustainable agriculture and environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium phaseoli
StrainCh24-10

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium phaseoli Ch24-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium phaseoli Ch24-10 plasmid pRphCh2410a, whole genome

Gene Summary

Adenine Count

69978 bp

Thymine Count

70549 bp

Guanine Count

114106 bp

Cytosine Count

113064 bp

Genome Length

367697 bp

Protein-coding Genes

355 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseRPHASCH2410_PA01675Q82M83Positive4759672 - 476053230509.0
3-keto-5-aminohexanoate cleavage proteinRPHASCH2410_PA01680Q88JU3Positive4760560 - 476244969660.1
hypothetical proteinRPHASCH2410_PA01685Not AvailablePositive4762654 - 476294410531.9
hypothetical proteinRPHASCH2410_PA01690Not AvailablePositive4763176 - 476411734843.3
3-oxoacyl-acp reductaseRPHASCH2410_PA01695C0KTJ6Negative4764089 - 476485326669.9
glucose dehydrogenaseRPHASCH2410_PA01700Not AvailableNegative4764895 - 476562325619.4
abc transporter permease proteinRPHASCH2410_PA01705Not AvailableNegative4765648 - 476690743847.0
abc transporter atp-binding proteinRPHASCH2410_PA01710P0DTT6Negative4766904 - 476772529122.1
abc transporter substrate-binding proteinRPHASCH2410_PA01715Not AvailableNegative4767794 - 476886737001.2
arac family transcriptional regulatorRPHASCH2410_PA01720Not AvailableNegative4769102 - 476998632812.5

Displaying genes 5001 – 5010 of 5205 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

42 records
Metabolite IDMetabolite nameStructureCAS number
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm0000899N-isopropylammelideC6H10N4O2Chemical structure of N-isopropylammelideNot available
Average170.172Da
Monoisotopic170.0803756Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012534,4-dimethyl-5alpha-cholesta-8,24-dien-3beta-olC29H48OChemical structure of 4,4-dimethyl-5alpha-cholesta-8,24-dien-3beta-ol59865-13-3
Average412.6908Da
Monoisotopic412.370516158Da
BASm0001345dibenzothiophene 5-oxideC12H8OSChemical structure of dibenzothiophene 5-oxideNot available
Average200.26Da
Monoisotopic200.0295861Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 42 metabolites

Health Effects

No health effects information available for this bacterium.