Sinorhizobium fredii CCBAU 25509

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium fredii CCBAU 25509 is a Gram-negative bacterium characterized by its bacilli shape and aerobic oxygen requirement. This organism is motile, facilitated by the presence of flagella, which allows it to navigate its environment effectively. Sinorhizobium fredii CCBAU 25509 thrives in mesophilic temperature ranges, making it well-suited for moderate temperature habitats. Genetically, this bacterium is notable for having two replicons, which may play a role in its adaptability and function within its ecological niche. The strain is associated with two specific genomic accessions: NZ_CP029452.1 and NZ_CP029453.1. These genetic sequences can provide insights into the metabolic pathways and characteristics of the bacterium, although specific functions are not detailed here. As a member of the Sinorhizobium genus, S. fredii CCBAU 25509 is known for its symbiotic relationship with legumes, contributing to nitrogen fixation. This interaction is crucial for soil fertility and plant health, illustrating the ecological importance of the species. Understanding the traits of S. fredii CCBAU 25509 enhances our knowledge of microbial interactions in agricultural systems, highlighting the significance of this bacterium in promoting sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium fredii
StrainCCBAU 25509

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium fredii CCBAU 25509
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete

Gene Summary

Adenine Count

420070 bp

Thymine Count

420415 bp

Guanine Count

685530 bp

Cytosine Count

684730 bp

Genome Length

2210745 bp

Protein-coding Genes

2114 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavin reductaseAOX55_RS28495Not AvailablePositive1641350 - 164186218574.1
5-carboxymethyl-2-hydroxymuconate delta-isomeraseAOX55_RS28500Not AvailablePositive1641958 - 164234414090.9
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseAOX55_RS28505Not AvailablePositive1642388 - 164390554468.2
3,4-dihydroxyphenylacetate 2,3-dioxygenaseAOX55_RS28510Not AvailablePositive1643967 - 164494737455.4
pyridoxal phosphate-dependent decarboxylase family proteinAOX55_RS28515Not AvailablePositive1645041 - 164645951684.5
fumarylacetoacetate hydrolase family proteinAOX55_RS28520Not AvailablePositive1646465 - 164733431862.8
2-oxo-hept-4-ene-1,7-dioate hydrataseAOX55_RS28525Not AvailablePositive1647337 - 164814028948.7
4-hydroxy-2-oxoheptanedioate aldolaseAOX55_RS28530Not AvailablePositive1648151 - 164895728200.2
homoprotocatechuate degradation operon regulator hparAOX55_RS28535Not AvailableNegative1648963 - 164946918616.4
hypothetical proteinAOX55_RS28540Not AvailablePositive1649737 - 165014715094.9

Displaying genes 1571 – 1580 of 2520 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.