Sinorhizobium fredii CCBAU 25509

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium fredii CCBAU 25509 is a Gram-negative bacterium characterized by its bacilli shape and aerobic oxygen requirement. This organism is motile, facilitated by the presence of flagella, which allows it to navigate its environment effectively. Sinorhizobium fredii CCBAU 25509 thrives in mesophilic temperature ranges, making it well-suited for moderate temperature habitats. Genetically, this bacterium is notable for having two replicons, which may play a role in its adaptability and function within its ecological niche. The strain is associated with two specific genomic accessions: NZ_CP029452.1 and NZ_CP029453.1. These genetic sequences can provide insights into the metabolic pathways and characteristics of the bacterium, although specific functions are not detailed here. As a member of the Sinorhizobium genus, S. fredii CCBAU 25509 is known for its symbiotic relationship with legumes, contributing to nitrogen fixation. This interaction is crucial for soil fertility and plant health, illustrating the ecological importance of the species. Understanding the traits of S. fredii CCBAU 25509 enhances our knowledge of microbial interactions in agricultural systems, highlighting the significance of this bacterium in promoting sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium fredii
StrainCCBAU 25509

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium fredii CCBAU 25509
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete

Gene Summary

Adenine Count

420070 bp

Thymine Count

420415 bp

Guanine Count

685530 bp

Cytosine Count

684730 bp

Genome Length

2210745 bp

Protein-coding Genes

2114 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar phosphate isomerase/epimerase family proteinAOX55_RS20910Not AvailableNegative96687 - 9750828837.3
gntr family transcriptional regulatorAOX55_RS20915Not AvailableNegative97508 - 9824527729.8
intradiol ring-cleavage dioxygenaseAOX55_RS20920Not AvailablePositive98501 - 9939433273.9
fumarylacetoacetate hydrolase family proteinAOX55_RS20925Not AvailablePositive99419 - 10020128044.1
4-hydroxy-2-oxoheptanedioate aldolaseAOX55_RS20930Not AvailablePositive100210 - 10100127942.6
transporter substrate-binding domain-containing proteinAOX55_RS20935Not AvailablePositive100988 - 10167124109.4
dna-binding proteinAOX55_RS34700Not AvailableNegative101779 - 1019586704.85
m10 family metallopeptidase c-terminal domain-containing proteinAOX55_RS35180Not AvailableNegative102621 - 10299812820.0
dna-binding proteinAOX55_RS20955Not AvailablePositive103300 - 10360811191.4
dj-1/pfpi family proteinAOX55_RS20960Not AvailableNegative103673 - 10426621718.2

Displaying genes 101 – 110 of 2520 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.