Bradyrhizobium sp. DOA1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium sp. DOA1 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This species exhibits a single replicon, indicating a streamlined genomic structure that may be advantageous for its adaptation and function within its ecological niche. The strain is cataloged under the accession number JXJM00000000.1, providing a reference for its genetic information. Bradyrhizobium species are well-known for their role in nitrogen fixation, often forming symbiotic relationships with leguminous plants. While specific symbiotic traits of Bradyrhizobium sp. DOA1 are not detailed in the provided data, the genus is generally recognized for enhancing soil fertility through nitrogen conversion, which is essential for plant growth. The presence of flagella in Bradyrhizobium sp. DOA1 suggests that it may effectively navigate its environment, potentially influencing its ability to colonize plant roots and establish symbiosis. This motility could enhance the bacterium's interaction with the root exudates of host plants, which are crucial for initiating the symbiotic process. Overall, the traits of Bradyrhizobium sp. DOA1 highlight its potential ecological role in nitrogen fixation and soil health. Understanding its characteristics can provide insights into the dynamics of plant-microbe interactions and the importance of microbial diversity in agricultural ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium sp. DOA1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium sp. DOA1 contig00204, whole genome shotgun

Gene Summary

Adenine Count

1346024 bp

Thymine Count

1341122 bp

Guanine Count

2368032 bp

Cytosine Count

2370016 bp

Genome Length

7543105 bp

Protein-coding Genes

6554 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxo-hepta-3-ene-1,7-dioate hydrataseSE91_20960Not AvailablePositive4470870 - 447167628929.7
5-carboxymethyl-2-hydroxymuconate isomeraseSE91_20965Not AvailablePositive4471722 - 447212014788.8
hypothetical proteinSE91_20970Not AvailablePositive4472202 - 447383057846.4
alpha-ketoglutarate-dependent dioxygenaseSE91_20975Not AvailableNegative4473956 - 447460923973.8
proline hydroxylaseSE91_20980Not AvailableNegative4474619 - 447536527853.4
hypothetical proteinSE91_20985Not AvailableNegative4475557 - 447624625234.1
amidaseSE91_20990Not AvailableNegative4476239 - 447758847335.8
dna-binding proteinSE91_20995Not AvailablePositive4477766 - 447817915262.5
thiolaseSE91_21000Not AvailablePositive4478183 - 447932240529.1
3-hydroxyacyl-coa dehydrogenaseSE91_21005Not AvailablePositive4479462 - 448037632536.1

Displaying genes 3991 – 4000 of 6608 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.