Limimaricola cinnabarinus str. XM1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Limimaricola

Description

Limimaricola cinnabarinus strain XM1 is a Gram-negative, rod-shaped bacterium. This specific strain is notable for its single replicon, which is a characteristic that can influence its genetic stability and replication process. The genome of this strain is cataloged under the accession number NQWH00000000.1, serving as a reference for further studies and analyses related to its genetic composition. The Gram-negative classification indicates that Limimaricola cinnabarinus str. XM1 possesses an outer membrane containing lipopolysaccharides, which can play a significant role in its interactions with the environment and other microorganisms. The rod shape of the bacterium is a common morphological feature that can affect its motility and ecological niches. Understanding the traits of Limimaricola cinnabarinus str. XM1 provides insights into its potential ecological roles. As a Gram-negative bacterium, it may be involved in nutrient cycling and interactions with other microbial communities. Its single replicon could suggest a streamlined evolutionary pathway, possibly adapting it to specific environmental conditions. Overall, the features of this strain highlight its potential importance in microbial ecology, particularly in habitats where such rod-shaped, Gram-negative organisms thrive.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusLimimaricola
SpeciesLimimaricola cinnabarinus
StrainXM1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limimaricola cinnabarinus strain XM1 contig92, whole genome

Gene Summary

Adenine Count

604786 bp

Thymine Count

608430 bp

Guanine Count

1280869 bp

Cytosine Count

1288700 bp

Genome Length

3782785 bp

Protein-coding Genes

3512 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fe3+/spermidine/putrescine abc transporter atp-binding proteinCJ301_02365Not AvailableNegative489834 - 49094040237.6
short-chain dehydrogenaseCJ301_02370Not AvailableNegative491040 - 49181927032.3
hypothetical proteinCJ301_02375Not AvailablePositive491893 - 49288836060.9
peptide chain release factor 3CJ301_02380Not AvailablePositive492941 - 49453659335.3
osmc family peroxiredoxinCJ301_02385Not AvailableNegative494597 - 49502514807.5
dead/deah box helicaseCJ301_02390Not AvailablePositive495226 - 49681858166.3
mbl fold hydrolaseCJ301_02395Not AvailableNegative496992 - 49865960172.6
pantothenate kinaseCJ301_02400Not AvailableNegative498656 - 49942928258.8
biotin--[acetyl-coa-carboxylase] ligaseCJ301_02405Not AvailableNegative499429 - 50015125500.1
nadh-quinone oxidoreductase subunit nCJ301_02410Not AvailableNegative500195 - 50162851423.2

Displaying genes 531 – 540 of 3605 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.