Limimaricola cinnabarinus str. XM1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Limimaricola

Description

Limimaricola cinnabarinus strain XM1 is a Gram-negative, rod-shaped bacterium. This specific strain is notable for its single replicon, which is a characteristic that can influence its genetic stability and replication process. The genome of this strain is cataloged under the accession number NQWH00000000.1, serving as a reference for further studies and analyses related to its genetic composition. The Gram-negative classification indicates that Limimaricola cinnabarinus str. XM1 possesses an outer membrane containing lipopolysaccharides, which can play a significant role in its interactions with the environment and other microorganisms. The rod shape of the bacterium is a common morphological feature that can affect its motility and ecological niches. Understanding the traits of Limimaricola cinnabarinus str. XM1 provides insights into its potential ecological roles. As a Gram-negative bacterium, it may be involved in nutrient cycling and interactions with other microbial communities. Its single replicon could suggest a streamlined evolutionary pathway, possibly adapting it to specific environmental conditions. Overall, the features of this strain highlight its potential importance in microbial ecology, particularly in habitats where such rod-shaped, Gram-negative organisms thrive.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusLimimaricola
SpeciesLimimaricola cinnabarinus
StrainXM1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limimaricola cinnabarinus strain XM1 contig92, whole genome

Gene Summary

Adenine Count

604786 bp

Thymine Count

608430 bp

Guanine Count

1280869 bp

Cytosine Count

1288700 bp

Genome Length

3782785 bp

Protein-coding Genes

3512 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine desulfuraseCJ301_09675Not AvailablePositive2001679 - 200295647889.1
hydroxyisourate hydrolaseCJ301_09680Not AvailablePositive2003091 - 200344412874.3
ureidoglycolate hydrolaseCJ301_09685Not AvailableNegative2003494 - 200398217545.9
polysaccharide deacetylaseCJ301_09690Not AvailableNegative2003979 - 200538852419.4
(s)-ureidoglycine aminohydrolaseCJ301_09695Not AvailablePositive2005584 - 200641430624.3
dipeptide abc transporter atp-binding protein dppdCJ301_09700Not AvailablePositive2006945 - 200793135751.3
oligopeptide abc transporter atp-binding proteinCJ301_09705Not AvailablePositive2007928 - 200903740167.2
abc transporter substrate-binding proteinCJ301_09710Not AvailablePositive2009066 - 201057755055.2
peptide abc transporterCJ301_09715Not AvailablePositive2010642 - 201158634212.2
diguanylate cyclaseCJ301_09720Not AvailablePositive2011664 - 201250629672.8

Displaying genes 1931 – 1940 of 3605 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.