Limimaricola cinnabarinus str. XM1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Limimaricola

Description

Limimaricola cinnabarinus strain XM1 is a Gram-negative, rod-shaped bacterium. This specific strain is notable for its single replicon, which is a characteristic that can influence its genetic stability and replication process. The genome of this strain is cataloged under the accession number NQWH00000000.1, serving as a reference for further studies and analyses related to its genetic composition. The Gram-negative classification indicates that Limimaricola cinnabarinus str. XM1 possesses an outer membrane containing lipopolysaccharides, which can play a significant role in its interactions with the environment and other microorganisms. The rod shape of the bacterium is a common morphological feature that can affect its motility and ecological niches. Understanding the traits of Limimaricola cinnabarinus str. XM1 provides insights into its potential ecological roles. As a Gram-negative bacterium, it may be involved in nutrient cycling and interactions with other microbial communities. Its single replicon could suggest a streamlined evolutionary pathway, possibly adapting it to specific environmental conditions. Overall, the features of this strain highlight its potential importance in microbial ecology, particularly in habitats where such rod-shaped, Gram-negative organisms thrive.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusLimimaricola
SpeciesLimimaricola cinnabarinus
StrainXM1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limimaricola cinnabarinus strain XM1 contig92, whole genome

Gene Summary

Adenine Count

604786 bp

Thymine Count

608430 bp

Guanine Count

1280869 bp

Cytosine Count

1288700 bp

Genome Length

3782785 bp

Protein-coding Genes

3512 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-directed rna polymerase subunit omegaCJ301_06780Not AvailableNegative1420850 - 142120313261.6
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseCJ301_06785Not AvailableNegative1421315 - 142190821111.5
nyn domain-containing proteinCJ301_06790Not AvailablePositive1422038 - 142260421618.6
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseCJ301_06795Not AvailablePositive1422706 - 142366534183.0
duf3429 domain-containing proteinCJ301_06800Not AvailablePositive1423662 - 142409615507.6
catalaseCJ301_06805Not AvailableNegative1424255 - 142507929854.4
ribonuclease hiCJ301_06810Not AvailablePositive1425219 - 142568616777.0
dna repair protein recoCJ301_06815Not AvailablePositive1425718 - 142644626037.6
hypothetical proteinCJ301_06820Not AvailablePositive1426512 - 142727626369.4
trna pseudouridine(55) synthase trubCJ301_06825Not AvailableNegative1427287 - 142819232152.3

Displaying genes 1401 – 1410 of 3605 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.