Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536

Gram-negativeSpirilla

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema socranskii subsp. socranskii VPI DR56BR1116, designated as ATCC 35536, is a Gram-negative bacterium characterized by its spiral shape, classified as a spirillum. This species possesses flagella, which contribute to its motility. Notably, Treponema socranskii subsp. socranskii has a single replicon, indicating a straightforward genomic organization. The bacterium is part of the Treponema genus, which includes various species known for their roles in human and animal health. Treponema socranskii subsp. socranskii is often associated with the oral cavity and has implications in periodontal disease. Understanding its characteristics is crucial for comprehending its ecological niche and potential pathogenicity. The genomic data for Treponema socranskii subsp. socranskii is available under the accession number AUZJ00000000.1, providing a resource for further study of its genetic makeup and traits. This information can be vital for researchers investigating the bacterium's role in oral microbiology and its interactions with host organisms. In summary, Treponema socranskii subsp. socranskii VPI DR56BR1116 exhibits key traits such as being Gram-negative, having a spirilla shape, the presence of flagella, and possessing a single replicon. These characteristics underscore its ecological significance, particularly in the context of oral health and disease.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema socranskii
Strainsubsp. socranskii VPI DR56BR1116 = ATCC 35536

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536

Gene Summary

Adenine Count

714518 bp

Thymine Count

704962 bp

Guanine Count

689424 bp

Cytosine Count

695724 bp

Genome Length

2804628 bp

Protein-coding Genes

2579 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cyclic nucleotide-binding domain proteinHMPREF1325_1941Not AvailablePositive730825 - 73149925206.7
alpha/beta hydrolase family proteinHMPREF1325_1942Not AvailableNegative731646 - 73281844216.6
dna-binding helix-turn-helix proteinHMPREF1325_1943Not AvailableNegative733029 - 73380529242.4
trap transporter solute receptor, taxi familyHMPREF1325_1944Not AvailableNegative733955 - 73494134378.4
trap transporter, 4tm/12tm fusion proteinHMPREF1325_1945Not AvailableNegative735100 - 73710671214.4
flavocytochrome cHMPREF1325_1946Not AvailablePositive737259 - 73906762337.0
Trna-lysNot AvailableNot AvailablePositive739160 - 739232Not Available
deoxyribose-phosphate aldolaseHMPREF1325_1948Not AvailableNegative739313 - 74004725151.9
ferredoxinHMPREF1325_1949Not AvailablePositive740190 - 7403635941.99
hypothetical proteinHMPREF1325_1950Not AvailablePositive740333 - 74082117442.2

Displaying genes 751 – 760 of 2692 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.