Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema socranskii |
| Strain | subsp. socranskii VPI DR56BR1116 = ATCC 35536 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
714518 bp
Thymine Count
704962 bp
Guanine Count
689424 bp
Cytosine Count
695724 bp
Genome Length
2804628 bp
Protein-coding Genes
2579 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1325_2110 | Not Available | Positive | 520904 - 521047 | 5594.04 |
| crispr-associated protein cas9/csn1, subtype ii/nmemi | HMPREF1325_2111 | Not Available | Positive | 521212 - 524598 | 130042.0 |
| crispr-associated endonuclease cas1, subtype ii/nmeni | HMPREF1325_2112 | Not Available | Positive | 524649 - 525554 | 34198.2 |
| crispr-associated endonuclease cas2 | HMPREF1325_2113 | Not Available | Positive | 525532 - 525867 | 13319.3 |
| recombination protein recr | HMPREF1325_2114 | Not Available | Negative | 528378 - 528968 | 21546.0 |
| dna-binding protein, ybab/ebfc family | HMPREF1325_2115 | Not Available | Negative | 528965 - 529276 | 11108.6 |
| dna polymerase iii, subunit gamma and tau | HMPREF1325_2116 | Not Available | Negative | 529277 - 531436 | 77577.7 |
| hypothetical protein | HMPREF1325_2117 | Not Available | Negative | 531589 - 532533 | 33563.9 |
| hypothetical protein | HMPREF1325_2118 | Not Available | Negative | 532697 - 532855 | 5964.43 |
| hypothetical protein | HMPREF1325_2119 | Not Available | Positive | 532885 - 533337 | 17158.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

