Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema socranskii |
| Strain | subsp. socranskii VPI DR56BR1116 = ATCC 35536 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
714518 bp
Thymine Count
704962 bp
Guanine Count
689424 bp
Cytosine Count
695724 bp
Genome Length
2804628 bp
Protein-coding Genes
2579 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1325_0061 | Not Available | Positive | 2353985 - 2355013 | 37523.7 |
| putative crispr-associated endonuclease cas3-hd | HMPREF1325_0062 | Not Available | Positive | 2355188 - 2355580 | 14292.6 |
| crispr-associated helicase cas3 | HMPREF1325_0063 | Not Available | Positive | 2355564 - 2357534 | 74164.3 |
| crispr-associated protein cas5 | HMPREF1325_0064 | Not Available | Positive | 2357552 - 2357671 | 4727.58 |
| flagellar filament 30.7 kda core protein flab3 | HMPREF1325_0714 | Not Available | Positive | 2357826 - 2358677 | 30593.1 |
| flag protein | HMPREF1325_0715 | Not Available | Positive | 2358783 - 2359169 | 13774.8 |
| flagellar hook-associated protein 2 | HMPREF1325_0716 | Not Available | Positive | 2359196 - 2361256 | 75165.3 |
| hypothetical protein | HMPREF1325_0717 | Not Available | Positive | 2361280 - 2361879 | 21758.8 |
| type iv pilus assembly protein pilz | HMPREF1325_0718 | Not Available | Positive | 2361869 - 2362963 | 41377.1 |
| hypothetical protein | HMPREF1325_0719 | Not Available | Positive | 2362995 - 2363258 | 9797.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

