Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema socranskii |
| Strain | subsp. socranskii VPI DR56BR1116 = ATCC 35536 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
714518 bp
Thymine Count
704962 bp
Guanine Count
689424 bp
Cytosine Count
695724 bp
Genome Length
2804628 bp
Protein-coding Genes
2579 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated protein cas7/csd2, subtype i-c/dvulg | HMPREF1325_0656 | Not Available | Positive | 2207461 - 2208333 | 32338.4 |
| crispr-associated protein cas4-like protein | HMPREF1325_0657 | Not Available | Positive | 2208333 - 2208971 | 24082.9 |
| crispr-associated endonuclease cas1, subtype i-c/dvulg | HMPREF1325_0658 | Not Available | Positive | 2208986 - 2210017 | 38820.2 |
| crispr-associated endonuclease cas2 | HMPREF1325_0659 | Not Available | Positive | 2210033 - 2210320 | 11033.5 |
| eama-like transporter family protein | HMPREF1325_0660 | Not Available | Negative | 2213608 - 2214630 | 37536.2 |
| l-fucose isomerase, c-terminal domain protein | HMPREF1325_0661 | Not Available | Positive | 2214662 - 2216194 | 56343.4 |
| periplasmic-binding protein domain protein | HMPREF1325_0662 | Not Available | Positive | 2216234 - 2217256 | 37392.7 |
| rna methyltransferase, trmh family | HMPREF1325_0663 | Not Available | Positive | 2217315 - 2218097 | 28524.7 |
| phosphodiesterase family protein | HMPREF1325_0664 | Not Available | Positive | 2218181 - 2218777 | 21626.2 |
| periplasmic solute-binding family protein | HMPREF1325_0665 | Not Available | Positive | 2218900 - 2219682 | 28093.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

