Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536

Gram-negativeSpirilla

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema socranskii subsp. socranskii VPI DR56BR1116, designated as ATCC 35536, is a Gram-negative bacterium characterized by its spiral shape, classified as a spirillum. This species possesses flagella, which contribute to its motility. Notably, Treponema socranskii subsp. socranskii has a single replicon, indicating a straightforward genomic organization. The bacterium is part of the Treponema genus, which includes various species known for their roles in human and animal health. Treponema socranskii subsp. socranskii is often associated with the oral cavity and has implications in periodontal disease. Understanding its characteristics is crucial for comprehending its ecological niche and potential pathogenicity. The genomic data for Treponema socranskii subsp. socranskii is available under the accession number AUZJ00000000.1, providing a resource for further study of its genetic makeup and traits. This information can be vital for researchers investigating the bacterium's role in oral microbiology and its interactions with host organisms. In summary, Treponema socranskii subsp. socranskii VPI DR56BR1116 exhibits key traits such as being Gram-negative, having a spirilla shape, the presence of flagella, and possessing a single replicon. These characteristics underscore its ecological significance, particularly in the context of oral health and disease.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema socranskii
Strainsubsp. socranskii VPI DR56BR1116 = ATCC 35536

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536


Gene Summary

Adenine Count

714518 bp

Thymine Count

704962 bp

Guanine Count

689424 bp

Cytosine Count

695724 bp

Genome Length

2804628 bp

Protein-coding Genes

2579 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Adenine-specific methyltransferaseHMPREF1325_1835Not AvailablePositive82353 - 8307226862.2
Trna-pro;Not AvailableNot AvailablePositive82896 - 82969Not Available
Virion morphogenesis proteinHMPREF1325_1836Not AvailablePositive83065 - 8440251504.6
hypothetical proteinHMPREF1325_1837Not AvailablePositive84693 - 8501011014.3
Cmp n-glycosidaseHMPREF1325_1838Not AvailablePositive85084 - 8538611414.9
hypothetical proteinHMPREF1325_1839Not AvailablePositive85373 - 855647111.15
hypothetical proteinHMPREF1325_1840Not AvailablePositive85649 - 8592410587.8
Hypothetical proteinHMPREF1325_1841Not AvailablePositive85982 - 862219513.64
ankyrin repeat proteinHMPREF1325_1842Not AvailableNegative86264 - 8713332309.0
Ci repressorHMPREF1325_1843Not AvailableNegative87160 - 8797230108.1

Displaying genes 11 – 20 of 2692 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.