Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536

Gram-negativeSpirilla

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema socranskii subsp. socranskii VPI DR56BR1116, designated as ATCC 35536, is a Gram-negative bacterium characterized by its spiral shape, classified as a spirillum. This species possesses flagella, which contribute to its motility. Notably, Treponema socranskii subsp. socranskii has a single replicon, indicating a straightforward genomic organization. The bacterium is part of the Treponema genus, which includes various species known for their roles in human and animal health. Treponema socranskii subsp. socranskii is often associated with the oral cavity and has implications in periodontal disease. Understanding its characteristics is crucial for comprehending its ecological niche and potential pathogenicity. The genomic data for Treponema socranskii subsp. socranskii is available under the accession number AUZJ00000000.1, providing a resource for further study of its genetic makeup and traits. This information can be vital for researchers investigating the bacterium's role in oral microbiology and its interactions with host organisms. In summary, Treponema socranskii subsp. socranskii VPI DR56BR1116 exhibits key traits such as being Gram-negative, having a spirilla shape, the presence of flagella, and possessing a single replicon. These characteristics underscore its ecological significance, particularly in the context of oral health and disease.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema socranskii
Strainsubsp. socranskii VPI DR56BR1116 = ATCC 35536

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536

Gene Summary

Adenine Count

714518 bp

Thymine Count

704962 bp

Guanine Count

689424 bp

Cytosine Count

695724 bp

Genome Length

2804628 bp

Protein-coding Genes

2579 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoenolpyruvate-dependent sugar pts family porter, eiia 2 componentHMPREF1325_0245Not AvailableNegative17400 - 1784616385.0
hypothetical proteinHMPREF1325_0246Not AvailableNegative18190 - 1864216037.8
hypothetical proteinHMPREF1325_1766Not AvailableNegative18838 - 1915211811.1
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive19358 - 19681Not Available
s-adenosyl-l-methionine hydroxide adenosyltransferase domain proteinHMPREF1325_1767Not AvailableNegative19498 - 2060439731.4
periplasmic-binding protein-like domain proteinHMPREF1325_1768Not AvailableNegative20670 - 2164736089.9
beta-lactamase family proteinHMPREF1325_1769Not AvailableNegative21663 - 2250831504.5
abc transporter, permease proteinHMPREF1325_1770Not AvailableNegative22516 - 2336131804.2
putative transmembrane permease msmfHMPREF1325_1771Not AvailableNegative23364 - 2426633591.0
abc transporter, solute-binding proteinHMPREF1325_1772Not AvailableNegative24339 - 2561646684.1

Displaying genes 121 – 130 of 2692 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.