Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema socranskii |
| Strain | subsp. paredis ATCC 35535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
704661 bp
Thymine Count
708421 bp
Guanine Count
642887 bp
Cytosine Count
675805 bp
Genome Length
2731774 bp
Protein-coding Genes
2426 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1221_00404 | Not Available | Negative | 429218 - 429619 | 14393.4 |
| hypothetical protein | HMPREF1221_00405 | Not Available | Negative | 429616 - 430365 | 26650.5 |
| hypothetical protein | HMPREF1221_00406 | Not Available | Negative | 430362 - 431324 | 37338.3 |
| transcription-repair coupling factor | HMPREF1221_00407 | Not Available | Positive | 431384 - 435244 | 144197.0 |
| hypothetical protein | HMPREF1221_00408 | Not Available | Positive | 435373 - 435648 | 10407.6 |
| rod shape-determining protein roda | HMPREF1221_00409 | Not Available | Negative | 436031 - 437347 | 48566.9 |
| penicillin-binding protein 2 | HMPREF1221_00410 | Not Available | Negative | 437352 - 439232 | 70535.3 |
| rod shape-determining protein mred | HMPREF1221_00411 | Not Available | Negative | 439229 - 439735 | 18317.9 |
| rod shape-determining protein mrec | HMPREF1221_00412 | Not Available | Negative | 439732 - 440595 | 32435.1 |
| mreb/mrl family cell shape determining protein | HMPREF1221_00413 | Not Available | Negative | 440605 - 441642 | 37288.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

